Structure of D-lactate dehydrogenase from Aquifex aeolicus complexed with NAD+ and lactic acid (or pyruvate)

被引:21
作者
Antonyuk, Svetlana V. [1 ]
Strange, Richard W. [1 ]
Ellis, Mark J. [2 ]
Bessho, Yoshitaka [3 ,4 ]
Kuramitsu, Seiki [4 ,5 ]
Inoue, Yumiko [4 ]
Yokoyama, Shigeyuki [3 ,4 ,6 ]
Hasnain, S. Samar [1 ]
机构
[1] Univ Liverpool, Mol Biophys Grp, Sch Biol Sci, Liverpool L69 7ZB, Merseyside, England
[2] STFC Daresbury Lab, Warrington WA4 4AD, Cheshire, England
[3] RIKEN, Yokohama Inst, Syst & Struct Biol Ctr, Yokohama, Kanagawa 2300045, Japan
[4] RIKEN SPring 8 Ctr, Harima Inst, Sayo, Hyogo 6795148, Japan
[5] Osaka Univ, Dept Biol Sci, Grad Sch Sci, Osaka 5600043, Japan
[6] Univ Tokyo, Dept Biophys & Biochem, Grad Sch Sci, Bunkyo Ku, Tokyo 1130033, Japan
来源
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS | 2009年 / 65卷
基金
英国生物技术与生命科学研究理事会;
关键词
FORMATE DEHYDROGENASE;
D O I
10.1107/S1744309109044935
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The crystal structure of D-lactate dehydrogenase from Aquifex aeolicus (aq_727) was determined to 2.12 angstrom resolution in space group P2(1)2(1)2(1), with unit-cell parameters a = 90.94, b = 94.43, c = 188.85 angstrom. The structure was solved by molecular replacement using the coenzyme-binding domain of Lactobacillus helveticus D-lactate dehydrogenase and contained two homodimers in the asymmetric unit. Each subunit of the homodimer was found to be in a 'closed' conformation with the NADH cofactor bound to the coenzyme-binding domain and with a lactate (or pyruvate) molecule bound at the interdomain active-site cleft.
引用
收藏
页码:1209 / 1213
页数:5
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