Ab initio structure determination of nanocrystals of organic pharmaceutical compounds by electron diffraction at room temperature using a Timepix quantum area direct electron detector

被引:122
作者
van Genderen, E. [1 ,2 ]
Clabbers, M. T. B. [1 ,2 ]
Das, P. P. [3 ]
Stewart, A. [4 ]
Nederlof, I. [1 ,5 ]
Barentsen, K. C. [1 ]
Portillo, Q. [3 ,6 ,7 ]
Pannu, N. S. [1 ]
Nicolopoulos, S. [3 ]
Gruene, T. [8 ]
Abrahams, J. P. [1 ,2 ,8 ]
机构
[1] Leiden Univ, Biophys Struct Chem, Einsteinweg 55, NL-2333 CC Leiden, Netherlands
[2] Univ Basel, Biozentrum, Ctr Cellular Imaging & NanoAnalyt C CINA, CH-4058 Basel, Switzerland
[3] Nanomegas SPRL, Blvd Edmond Machtens 79, B-1080 Brussels, Belgium
[4] Univ Limerick, Dept Phys & Energy, MSSI, Limerick, Ireland
[5] Amsterdam Sci Instruments, Postbus 41882, NL-1009 DB Amsterdam, Netherlands
[6] Univ Barcelona, Ctr Cient, Carrer Lluis Sole Sabaris 1-3, Barcelona, Spain
[7] Univ Barcelona, Ctr Tecnol, Carrer Lluis Sole Sabaris 1-3, Barcelona, Spain
[8] Paul Scherrer Inst, Biol & Chem, Lab Biomol Res, CH-5232 Villigen, Switzerland
来源
ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES | 2016年 / 72卷
关键词
electron nanocrystallography; Timepix quantum area detector; carbamazepine; nicotinic acid; electron diffraction structure determination; PIXEL READOUT CHIP; DATA-COLLECTION; TOMOGRAPHY; REFINEMENT; MICROSCOPY;
D O I
10.1107/S2053273315022500
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Until recently, structure determination by transmission electron microscopy of beam-sensitive three-dimensional nanocrystals required electron diffraction tomography data collection at liquid-nitrogen temperature, in order to reduce radiation damage. Here it is shown that the novel Timepix detector combines a high dynamic range with a very high signal-to-noise ratio and single-electron sensitivity, enabling ab initio phasing of beam-sensitive organic compounds. Low-dose electron diffraction data (similar to 0.013 e(-) angstrom(-2) s(-1)) were collected at room temperature with the rotation method. It was ascertained that the data were of sufficient quality for structure solution using direct methods using software developed for X-ray crystallography (XDS, SHELX) and for electron crystallography (ADT3D/PETS, SIR2014).
引用
收藏
页码:236 / 242
页数:7
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