SARS-CoV-2 specific CD8+ T cell responses in convalescent COVID-19 individuals

被引:184
作者
Kared, Hassen [1 ]
Redd, Andrew D. [2 ,3 ]
Bloch, Evan M. [4 ]
Bonny, Tania S. [4 ]
Sumatoh, Hermi [1 ]
Kairi, Faris [1 ]
Carbajo, Daniel [1 ]
Abel, Brian [1 ]
Newell, Evan W. [1 ,5 ]
Bettinotti, Maria P. [4 ]
Benner, Sarah E. [4 ]
Patel, Eshan U. [4 ,6 ]
Littlefield, Kirsten [7 ]
Laeyendecker, Oliver [2 ,3 ]
Shoham, Shmuel [3 ]
Sullivan, David [7 ]
Casadevall, Arturo [7 ]
Pekosz, Andrew [7 ]
Nardin, Alessandra [1 ]
Fehlings, Michael [1 ]
Tobian, Aaron A. R. [4 ]
Quinn, Thomas C. [2 ,3 ]
机构
[1] ImmunoScape, Singapore, Singapore
[2] NIAID, Div Intramural Res, NIH, 9000 Rockville Pike, Bethesda, MD 20892 USA
[3] Johns Hopkins Univ, Sch Med, Dept Med, Baltimore, MD 21205 USA
[4] Johns Hopkins Univ, Sch Med, Dept Pathol, Baltimore, MD 21205 USA
[5] Fred Hutchinson Canc Res Ctr, Vaccine & Infect Dis Div, 1124 Columbia St, Seattle, WA 98104 USA
[6] Johns Hopkins Bloomberg Sch Publ Hlth, Dept Epidemiol, Baltimore, MD USA
[7] Johns Hopkins Bloomberg Sch Publ Hlth, Dept Mol Microbiol & Immunol, Baltimore, MD USA
关键词
D O I
10.1172/JCI145476
中图分类号
R-3 [医学研究方法]; R3 [基础医学];
学科分类号
1001 ;
摘要
Characterization of the T cell response in individuals who recover from severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection is critical to understanding its contribution to protective immunity. A multiplexed peptide-MHC tetramer approach was used to screen 408 SARS-CoV-2 candidate epitopes for CD8(+) T cell recognition in a cross-sectional sample of 30 coronavirus disease 2019 convalescent individuals. T cells were evaluated using a 28-marker phenotypic panel, and findings were modelled against time from diagnosis and from humoral and inflammatory responses. There were 132 SARS-CoV-2-specific CO8(+) T cell responses detected across 6 different HLAs, corresponding to 52 unique epitope reactivities. CD8(+) T cell responses were detected in almost all convalescent individuals and were directed against several structural and nonstructural target epitopes from the entire SARS-CoV-2 proteome. A unique phenotype for SARS-CoV-2-specific T cells was observed that was distinct from other common virus-specific T cells detected in the same cross-sectional sample and characterized by early differentiation kinetics. Modelling demonstrated a coordinated and dynamic immune response characterized by a decrease in inflammation, increase in neutralizing antibody titer, and differentiation of a specific CD8(+)T cell response. Overall, T cells exhibited distinct differentiation into stem cell and transitional memory states (subsets), which may be key to developing durable protection.
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页数:14
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