A new single nucleotide polymorphisms typing method and device by bioluminometric assay coupled with a photodiode array

被引:10
|
作者
Kamahori, M [1 ]
Harada, K [1 ]
Kambara, H [1 ]
机构
[1] Hitachi Ltd, Cent Res Lab, Tokyo 1858601, Japan
关键词
SNP; bioluminescence; photodiode array; micro-dispenser;
D O I
10.1088/0957-0233/13/11/314
中图分类号
T [工业技术];
学科分类号
08 ;
摘要
Easy and inexpensive single nucleotide polymorphisms (SNPs) typing systems are required for the practice of genetic testing as well as genetic medicine. Most of the SNPs typing systems use laser-induced fluorescence detection coupled with fluorophore tagging on DNA, which are expensive. A new simple and inexpensive SNPs typing system is presented. It uses a bioluminometric assay coupled with modified primer extension reactions and an inexpensive photodiode array for the luminometric detection. The reagents consumed in the assay are also inexpensive. Although the system is very small, simple and inexpensive, it gives enough sensitivity for detecting target DNAs as small as 10 fmol, which is good enough for SNPs typing.
引用
收藏
页码:1779 / 1785
页数:7
相关论文
共 31 条
  • [1] Typing of single nucleotide polymorphisms by MALDI mass spectrometry: Principles and diagnostic applications
    Sauer, S
    CLINICA CHIMICA ACTA, 2006, 363 (1-2) : 95 - 105
  • [2] Accuracy of genotyping for single nucleotide polymorphisms by a microarray-based single nucleotide polymorphism typing method involving hybridization of short allele-specific oligonucleotides
    Iwasaki, H
    Ezura, Y
    Ishida, R
    Kajita, M
    Kodaira, M
    Knight, J
    Daniel, S
    Shi, M
    Emi, M
    DNA RESEARCH, 2002, 9 (02) : 59 - 62
  • [3] Automated single nucleotide polymorphism typing using bead array in capillary tube
    Kagawa, Yasuo
    Hiraoka, Mami
    Miyashita-Hatano, Yukiko
    Shishido-Oki, Madoka
    Yoshida, Mamiko
    Kondou, Susumu
    Sugiura, Mika
    Sawakami-Kobayashi, Kazumi
    Takahashi, Masaaki
    Tajima, Hideji
    Yohda, Masafumi
    JOURNAL OF BIOSCIENCE AND BIOENGINEERING, 2010, 110 (04) : 505 - 508
  • [4] A multiplex bead-based suspension array assay for interrogation of phylogenetically informative single nucleotide polymorphisms for Bacillus anthracis
    Thierry, Simon
    Hamidjaja, Raditijo A.
    Girault, Guillaume
    Lofstrom, Charlotta
    Ruuls, Robin
    Sylviane, Derzelle
    JOURNAL OF MICROBIOLOGICAL METHODS, 2013, 95 (03) : 357 - 365
  • [5] A Method for Predicting Allelic Variants of Single Nucleotide Polymorphisms
    Tyagunova, Ekaterina Evgenyevna
    Zakharov, Alexander Sergeevich
    Pavlova, Galina Valerievna
    Ogarkova, Daria Alexandrovna
    Zhuchenko, Natalia Alexandrovna
    Gushchin, Vladimir Alexeyevich
    CURRENT TOPICS IN MEDICINAL CHEMISTRY, 2024,
  • [6] Forensic assessment of 16 single nucleotide polymorphisms analyzed by hybridization probe assay
    Hiratsuka, M
    Tsukamoto, N
    Konno, Y
    Nata, M
    Hashiyada, M
    Funayama, M
    Mizugaki, M
    TOHOKU JOURNAL OF EXPERIMENTAL MEDICINE, 2005, 207 (04) : 255 - 261
  • [7] A new PCR-SSP typing method for six single-nucleotide polymorphisms impairing the blood-clotting cascade as well as T-cell stimulation
    Meyer, M
    Czachurski, D
    Hien, T
    Opelz, G
    Mytilineos, J
    TISSUE ANTIGENS, 2005, 66 (06): : 650 - 655
  • [8] The Allele-Specific Probe and Primer Amplification Assay, a New Real-Time PCR Method for Fine Quantification of Single-Nucleotide Polymorphisms in Pooled DNA
    Billard, A.
    Laval, V.
    Fillinger, S.
    Leroux, P.
    Lachaise, H.
    Beffa, R.
    Debieu, D.
    APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2012, 78 (04) : 1063 - 1068
  • [9] A Restricted Partition Method to Detect Single Nucleotide Polymorphisms for a Carcass Trait in Hanwoo
    Lee, Ji-Hong
    Kim, Dong Chul
    Kim, Jong-Joo
    Lee, Jea-Young
    ASIAN-AUSTRALASIAN JOURNAL OF ANIMAL SCIENCES, 2011, 24 (11): : 1525 - 1528
  • [10] A software facilitating adapter-ligation mediated allele-specific amplification for typing multiplex single nucleotide polymorphisms
    Wang, Weipeng
    Sun, Wenming
    Wu, Wenjuan
    Zhou, Guohua
    PROGRESS ON POST-GENOME TECHNOLOGIES, 2007, : 105 - 108