共 30 条
Integrated bioinformatics analysis of miRNA expression in osteosarcoma
被引:29
作者:

Wang, Maoyuan
论文数: 0 引用数: 0
h-index: 0
机构:
Sichuan Univ, West China Sch Med, Chengdu, Peoples R China Sichuan Univ, West China Sch Med, Chengdu, Peoples R China

Xie, Ruilian
论文数: 0 引用数: 0
h-index: 0
机构:
Gannan Med Coll, Dept Med Oncol, Affiliated Hosp 1, Ganzhou, Peoples R China Sichuan Univ, West China Sch Med, Chengdu, Peoples R China

Si, Haibo
论文数: 0 引用数: 0
h-index: 0
机构:
Sichuan Univ, West China Hosp, Dept Orthopaed, 37 Guoxue Rd, Chengdu 610041, Peoples R China Sichuan Univ, West China Sch Med, Chengdu, Peoples R China

Shen, Bin
论文数: 0 引用数: 0
h-index: 0
机构:
Sichuan Univ, West China Hosp, Dept Orthopaed, 37 Guoxue Rd, Chengdu 610041, Peoples R China Sichuan Univ, West China Sch Med, Chengdu, Peoples R China
机构:
[1] Sichuan Univ, West China Sch Med, Chengdu, Peoples R China
[2] Gannan Med Coll, Dept Med Oncol, Affiliated Hosp 1, Ganzhou, Peoples R China
[3] Sichuan Univ, West China Hosp, Dept Orthopaed, 37 Guoxue Rd, Chengdu 610041, Peoples R China
关键词:
miRNA expression;
osteosarcoma;
SIX3;
target genes;
CHOLINE PHOSPHOLIPID-METABOLISM;
GROWTH-FACTOR RECEPTOR;
CELL-PROLIFERATION;
GENE;
CANCER;
TRANSACTIVATION;
TRANSCRIPTION;
COREPRESSOR;
PROGRESSION;
SIGNATURES;
D O I:
10.1080/21691401.2016.1196456
中图分类号:
Q81 [生物工程学(生物技术)];
Q93 [微生物学];
学科分类号:
071005 ;
0836 ;
090102 ;
100705 ;
摘要:
The expression of miRNA influencing the pathogenesis of OS have been reported previously, however, different samples selection and sequencing platforms made obvious differences in miRNA expression analysis. We aim to identify reliable prognostic and treatment biomarkers for OS by systematic analysis of miRNAs expression data sets from biased data set. Seven miRNA data sets were selected from corresponding articles. Collectively, two miRNAs, hsa-miR-19-3p and hsa-miR106b-3p, and transcription factor SIX3 were identified and may be reliable markers for prognostic and treatment of osteosarcoma.
引用
收藏
页码:936 / 943
页数:8
相关论文
共 30 条
[1]
Epidermal growth factor receptor transactivation mediates tumor necrosis factor-induced hepatocyte replication
[J].
Argast, GM
;
Campbell, JS
;
Brooling, JT
;
Fausto, N
.
JOURNAL OF BIOLOGICAL CHEMISTRY,
2004, 279 (33)
:34530-34536

Argast, GM
论文数: 0 引用数: 0
h-index: 0
机构: Univ Washington, Dept Pathol, Seattle, WA 98195 USA

Campbell, JS
论文数: 0 引用数: 0
h-index: 0
机构: Univ Washington, Dept Pathol, Seattle, WA 98195 USA

Brooling, JT
论文数: 0 引用数: 0
h-index: 0
机构: Univ Washington, Dept Pathol, Seattle, WA 98195 USA

Fausto, N
论文数: 0 引用数: 0
h-index: 0
机构: Univ Washington, Dept Pathol, Seattle, WA 98195 USA
[2]
Differential expression of microRNAs in plasma of patients with laryngeal squamous cell carcinoma: potential early-detection markers for laryngeal squamous cell carcinoma
[J].
Ayaz, Lokman
;
Gorur, Aysegul
;
Yaroglu, Hatice Yildirim
;
Ozcan, Cengiz
;
Tamer, Lulufer
.
JOURNAL OF CANCER RESEARCH AND CLINICAL ONCOLOGY,
2013, 139 (09)
:1499-1506

论文数: 引用数:
h-index:
机构:

Gorur, Aysegul
论文数: 0 引用数: 0
h-index: 0
机构:
Mersin Univ, Dept Biochem, Fac Med, TR-33079 Mersin, Turkey Trakya Univ, Dept Biochem, Fac Pharm, TR-22030 Edirne, Turkey

Yaroglu, Hatice Yildirim
论文数: 0 引用数: 0
h-index: 0
机构:
Mersin Univ, Dept Biochem, Fac Med, TR-33079 Mersin, Turkey Trakya Univ, Dept Biochem, Fac Pharm, TR-22030 Edirne, Turkey

Ozcan, Cengiz
论文数: 0 引用数: 0
h-index: 0
机构:
Mersin Univ, Dept Otorhinolaryngol Head & Neck Surg, Fac Med, TR-33079 Mersin, Turkey Trakya Univ, Dept Biochem, Fac Pharm, TR-22030 Edirne, Turkey

Tamer, Lulufer
论文数: 0 引用数: 0
h-index: 0
机构:
Mersin Univ, Dept Biochem, Fac Med, TR-33079 Mersin, Turkey Trakya Univ, Dept Biochem, Fac Pharm, TR-22030 Edirne, Turkey
[3]
Human microRNA genes are frequently located at fragile sites and genomic regions involved in cancers
[J].
Calin, GA
;
Sevignani, C
;
Dan Dumitru, C
;
Hyslop, T
;
Noch, E
;
Yendamuri, S
;
Shimizu, M
;
Rattan, S
;
Bullrich, F
;
Negrini, M
;
Croce, CM
.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA,
2004, 101 (09)
:2999-3004

Calin, GA
论文数: 0 引用数: 0
h-index: 0
机构: Thomas Jefferson Univ, Jefferson Med Coll, Dept Microbiol & Immunol, Biostat Sect,Div Clin Pharmacol,Kimmel Canc Ctr, Philadelphia, PA 19107 USA

Sevignani, C
论文数: 0 引用数: 0
h-index: 0
机构: Thomas Jefferson Univ, Jefferson Med Coll, Dept Microbiol & Immunol, Biostat Sect,Div Clin Pharmacol,Kimmel Canc Ctr, Philadelphia, PA 19107 USA

Dan Dumitru, C
论文数: 0 引用数: 0
h-index: 0
机构: Thomas Jefferson Univ, Jefferson Med Coll, Dept Microbiol & Immunol, Biostat Sect,Div Clin Pharmacol,Kimmel Canc Ctr, Philadelphia, PA 19107 USA

Hyslop, T
论文数: 0 引用数: 0
h-index: 0
机构: Thomas Jefferson Univ, Jefferson Med Coll, Dept Microbiol & Immunol, Biostat Sect,Div Clin Pharmacol,Kimmel Canc Ctr, Philadelphia, PA 19107 USA

Noch, E
论文数: 0 引用数: 0
h-index: 0
机构: Thomas Jefferson Univ, Jefferson Med Coll, Dept Microbiol & Immunol, Biostat Sect,Div Clin Pharmacol,Kimmel Canc Ctr, Philadelphia, PA 19107 USA

Yendamuri, S
论文数: 0 引用数: 0
h-index: 0
机构: Thomas Jefferson Univ, Jefferson Med Coll, Dept Microbiol & Immunol, Biostat Sect,Div Clin Pharmacol,Kimmel Canc Ctr, Philadelphia, PA 19107 USA

Shimizu, M
论文数: 0 引用数: 0
h-index: 0
机构: Thomas Jefferson Univ, Jefferson Med Coll, Dept Microbiol & Immunol, Biostat Sect,Div Clin Pharmacol,Kimmel Canc Ctr, Philadelphia, PA 19107 USA

Rattan, S
论文数: 0 引用数: 0
h-index: 0
机构: Thomas Jefferson Univ, Jefferson Med Coll, Dept Microbiol & Immunol, Biostat Sect,Div Clin Pharmacol,Kimmel Canc Ctr, Philadelphia, PA 19107 USA

Bullrich, F
论文数: 0 引用数: 0
h-index: 0
机构: Thomas Jefferson Univ, Jefferson Med Coll, Dept Microbiol & Immunol, Biostat Sect,Div Clin Pharmacol,Kimmel Canc Ctr, Philadelphia, PA 19107 USA

Negrini, M
论文数: 0 引用数: 0
h-index: 0
机构: Thomas Jefferson Univ, Jefferson Med Coll, Dept Microbiol & Immunol, Biostat Sect,Div Clin Pharmacol,Kimmel Canc Ctr, Philadelphia, PA 19107 USA

Croce, CM
论文数: 0 引用数: 0
h-index: 0
机构: Thomas Jefferson Univ, Jefferson Med Coll, Dept Microbiol & Immunol, Biostat Sect,Div Clin Pharmacol,Kimmel Canc Ctr, Philadelphia, PA 19107 USA
[4]
DAVID: Database for annotation, visualization, and integrated discovery
[J].
Dennis, G
;
Sherman, BT
;
Hosack, DA
;
Yang, J
;
Gao, W
;
Lane, HC
;
Lempicki, RA
.
GENOME BIOLOGY,
2003, 4 (09)

Dennis, G
论文数: 0 引用数: 0
h-index: 0
机构: NCI, Sci Applicat Int Corp, Clin Serv Program, Lab Immunopathogenesis & Bioinformat, Frederick, MD 21702 USA

Sherman, BT
论文数: 0 引用数: 0
h-index: 0
机构: NCI, Sci Applicat Int Corp, Clin Serv Program, Lab Immunopathogenesis & Bioinformat, Frederick, MD 21702 USA

Hosack, DA
论文数: 0 引用数: 0
h-index: 0
机构: NCI, Sci Applicat Int Corp, Clin Serv Program, Lab Immunopathogenesis & Bioinformat, Frederick, MD 21702 USA

Yang, J
论文数: 0 引用数: 0
h-index: 0
机构: NCI, Sci Applicat Int Corp, Clin Serv Program, Lab Immunopathogenesis & Bioinformat, Frederick, MD 21702 USA

Gao, W
论文数: 0 引用数: 0
h-index: 0
机构: NCI, Sci Applicat Int Corp, Clin Serv Program, Lab Immunopathogenesis & Bioinformat, Frederick, MD 21702 USA

Lane, HC
论文数: 0 引用数: 0
h-index: 0
机构: NCI, Sci Applicat Int Corp, Clin Serv Program, Lab Immunopathogenesis & Bioinformat, Frederick, MD 21702 USA

Lempicki, RA
论文数: 0 引用数: 0
h-index: 0
机构:
NCI, Sci Applicat Int Corp, Clin Serv Program, Lab Immunopathogenesis & Bioinformat, Frederick, MD 21702 USA NCI, Sci Applicat Int Corp, Clin Serv Program, Lab Immunopathogenesis & Bioinformat, Frederick, MD 21702 USA
[5]
Specificity of microRNA target selection in translational repression
[J].
Doench, JG
;
Sharp, PA
.
GENES & DEVELOPMENT,
2004, 18 (05)
:504-511

Doench, JG
论文数: 0 引用数: 0
h-index: 0
机构: MIT, Canc Res Ctr, Dept Biol, Cambridge, MA 02139 USA

Sharp, PA
论文数: 0 引用数: 0
h-index: 0
机构: MIT, Canc Res Ctr, Dept Biol, Cambridge, MA 02139 USA
[6]
MicroRNA-199a-3p Is Downregulated in Human Osteosarcoma and Regulates Cell Proliferation and Migration
[J].
Duan, Zhenfeng
;
Choy, Edwin
;
Harmon, David
;
Liu, Xianzhe
;
Susa, Michiro
;
Mankin, Henry
;
Hornicek, Francis
.
MOLECULAR CANCER THERAPEUTICS,
2011, 10 (08)
:1337-1345

Duan, Zhenfeng
论文数: 0 引用数: 0
h-index: 0
机构:
Massachusetts Gen Hosp, Ctr Sarcoma & Connect Tissue Oncol, Boston, MA 02114 USA Massachusetts Gen Hosp, Ctr Sarcoma & Connect Tissue Oncol, Boston, MA 02114 USA

Choy, Edwin
论文数: 0 引用数: 0
h-index: 0
机构:
Massachusetts Gen Hosp, Ctr Sarcoma & Connect Tissue Oncol, Boston, MA 02114 USA Massachusetts Gen Hosp, Ctr Sarcoma & Connect Tissue Oncol, Boston, MA 02114 USA

Harmon, David
论文数: 0 引用数: 0
h-index: 0
机构:
Massachusetts Gen Hosp, Ctr Sarcoma & Connect Tissue Oncol, Boston, MA 02114 USA Massachusetts Gen Hosp, Ctr Sarcoma & Connect Tissue Oncol, Boston, MA 02114 USA

Liu, Xianzhe
论文数: 0 引用数: 0
h-index: 0
机构:
Massachusetts Gen Hosp, Ctr Sarcoma & Connect Tissue Oncol, Boston, MA 02114 USA Massachusetts Gen Hosp, Ctr Sarcoma & Connect Tissue Oncol, Boston, MA 02114 USA

Susa, Michiro
论文数: 0 引用数: 0
h-index: 0
机构:
Massachusetts Gen Hosp, Ctr Sarcoma & Connect Tissue Oncol, Boston, MA 02114 USA Massachusetts Gen Hosp, Ctr Sarcoma & Connect Tissue Oncol, Boston, MA 02114 USA

Mankin, Henry
论文数: 0 引用数: 0
h-index: 0
机构:
Massachusetts Gen Hosp, Ctr Sarcoma & Connect Tissue Oncol, Boston, MA 02114 USA Massachusetts Gen Hosp, Ctr Sarcoma & Connect Tissue Oncol, Boston, MA 02114 USA

Hornicek, Francis
论文数: 0 引用数: 0
h-index: 0
机构:
Massachusetts Gen Hosp, Ctr Sarcoma & Connect Tissue Oncol, Boston, MA 02114 USA Massachusetts Gen Hosp, Ctr Sarcoma & Connect Tissue Oncol, Boston, MA 02114 USA
[7]
Transcription factor regulation can be accurately predicted from the presence of target gene signatures in microarray gene expression data
[J].
Essaghir, Ahmed
;
Toffalini, Federica
;
Knoops, Laurent
;
Kallin, Anders
;
van Helden, Jacques
;
Demoulin, Jean-Baptiste
.
NUCLEIC ACIDS RESEARCH,
2010, 38 (11)
:e120-e120

Essaghir, Ahmed
论文数: 0 引用数: 0
h-index: 0
机构:
Catholic Univ Louvain, de Duve Inst, B-1200 Brussels, Belgium Catholic Univ Louvain, de Duve Inst, B-1200 Brussels, Belgium

Toffalini, Federica
论文数: 0 引用数: 0
h-index: 0
机构:
Catholic Univ Louvain, de Duve Inst, B-1200 Brussels, Belgium Catholic Univ Louvain, de Duve Inst, B-1200 Brussels, Belgium

Knoops, Laurent
论文数: 0 引用数: 0
h-index: 0
机构:
Catholic Univ Louvain, de Duve Inst, B-1200 Brussels, Belgium
Clin Univ St Luc, Div Hematol, B-1200 Brussels, Belgium Catholic Univ Louvain, de Duve Inst, B-1200 Brussels, Belgium

Kallin, Anders
论文数: 0 引用数: 0
h-index: 0
机构:
Catholic Univ Louvain, de Duve Inst, B-1200 Brussels, Belgium Catholic Univ Louvain, de Duve Inst, B-1200 Brussels, Belgium

van Helden, Jacques
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Libre Bruxelles, B-1050 Brussels, Belgium Catholic Univ Louvain, de Duve Inst, B-1200 Brussels, Belgium

Demoulin, Jean-Baptiste
论文数: 0 引用数: 0
h-index: 0
机构:
Catholic Univ Louvain, de Duve Inst, B-1200 Brussels, Belgium Catholic Univ Louvain, de Duve Inst, B-1200 Brussels, Belgium
[8]
Molecular causes of the aberrant choline phospholipid metabolism in breast cancer
[J].
Glunde, K
;
Jie, C
;
Bhujwalla, ZM
.
CANCER RESEARCH,
2004, 64 (12)
:4270-4276

Glunde, K
论文数: 0 引用数: 0
h-index: 0
机构: Johns Hopkins Univ, Sch Med, Dept Radiol, Div Magnet Resonance Res,Magnet Resonance Oncol S, Baltimore, MD 21205 USA

Jie, C
论文数: 0 引用数: 0
h-index: 0
机构: Johns Hopkins Univ, Sch Med, Dept Radiol, Div Magnet Resonance Res,Magnet Resonance Oncol S, Baltimore, MD 21205 USA

Bhujwalla, ZM
论文数: 0 引用数: 0
h-index: 0
机构: Johns Hopkins Univ, Sch Med, Dept Radiol, Div Magnet Resonance Res,Magnet Resonance Oncol S, Baltimore, MD 21205 USA
[9]
miRBase: tools for microRNA genomics
[J].
Griffiths-Jones, Sam
;
Saini, Harpreet Kaur
;
van Dongen, Stijn
;
Enright, Anton J.
.
NUCLEIC ACIDS RESEARCH,
2008, 36
:D154-D158

Griffiths-Jones, Sam
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Manchester, Fac Life Sci, Manchester M13 9PT, Lancs, England Univ Manchester, Fac Life Sci, Manchester M13 9PT, Lancs, England

Saini, Harpreet Kaur
论文数: 0 引用数: 0
h-index: 0
机构:
Wellcome Trust Sanger Inst, Cambridge CB10 1SA, Hinxton, England Univ Manchester, Fac Life Sci, Manchester M13 9PT, Lancs, England

van Dongen, Stijn
论文数: 0 引用数: 0
h-index: 0
机构:
Wellcome Trust Sanger Inst, Cambridge CB10 1SA, Hinxton, England Univ Manchester, Fac Life Sci, Manchester M13 9PT, Lancs, England

Enright, Anton J.
论文数: 0 引用数: 0
h-index: 0
机构:
Wellcome Trust Sanger Inst, Cambridge CB10 1SA, Hinxton, England Univ Manchester, Fac Life Sci, Manchester M13 9PT, Lancs, England
[10]
Cannabinoids induce cancer cell proliferation via tumor necrosis factor α-converting enzyme (TACE/ADAM17)-mediated transactivation of the epidermal growth factor receptor
[J].
Hart, S
;
Fischer, OM
;
Ullrich, A
.
CANCER RESEARCH,
2004, 64 (06)
:1943-1950

Hart, S
论文数: 0 引用数: 0
h-index: 0
机构:
Max Planck Inst Biochem, Dept Mol Biol, D-82152 Martinsried, Germany Max Planck Inst Biochem, Dept Mol Biol, D-82152 Martinsried, Germany

Fischer, OM
论文数: 0 引用数: 0
h-index: 0
机构:
Max Planck Inst Biochem, Dept Mol Biol, D-82152 Martinsried, Germany Max Planck Inst Biochem, Dept Mol Biol, D-82152 Martinsried, Germany

Ullrich, A
论文数: 0 引用数: 0
h-index: 0
机构:
Max Planck Inst Biochem, Dept Mol Biol, D-82152 Martinsried, Germany Max Planck Inst Biochem, Dept Mol Biol, D-82152 Martinsried, Germany