CircRNAs and cancer: Biomarkers and master regulators

被引:321
作者
Arnaiz, Esther [1 ]
Sole, Carla [1 ]
Manterola, Lorea [1 ]
Iparraguirre, Leire [2 ]
Otaegui, David [2 ]
Lawrie, Charles H. [1 ,3 ,4 ]
机构
[1] Biodonostia Res Inst, Mol Oncol Grp, Paseo Doctor Begiristain S-N, San Sebastian 20014, Spain
[2] Biodonostia Res Inst, Multiple Sclerosis Grp, Paseo Doctor Begiristain S-N, San Sebastian 20014, Spain
[3] Univ Oxford, John Radcliffe Hosp, Radcliffe Dept Med, Oxford OX3 9DU, England
[4] Ikerbasque, Basque Fdn Sci, Maria Diaz Haroko Kalea 3, Bilbao 48013, Spain
关键词
circRNA; Biomarkers; Liquid biopsies; Non-coding RNA; CIRCULAR RNA EXPRESSION; COLORECTAL-CANCER; GASTRIC-CANCER; CELL-PROLIFERATION; LUNG-CANCER; REVEALS; GENE; TRANSCRIPTS; BIOGENESIS; MIGRATION;
D O I
10.1016/j.semcancer.2018.12.002
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Circular RNAs (circRNAs) are a novel class of regulatory RNAs that despite being relatively abundant have only recently begun to be explored. There are many thousands of genes that appear capable of producing circRNAs, however the function of all but a handful remain to be determined. What is emerging about these highly conserved molecules is that they play important roles in biology and cancer biology in particular. The most explored function of circRNAs is as master regulators of gene expression that act to sequester or 'sponge' other gene expression regulators, in particular miRNAs. They have also been demonstrated to function via direct modulation of transcription, and by interfering with splicing mechanisms. Although generally expressed in low abundance when compared to their linear counterparts, they are often expressed in a tissue- and developmental stage-specific manner. Coupled with their remarkable resistance to RNAse activity due to a covalent closed cyclic structure, circRNAs show great promise as novel biomarkers of cancer and other diseases. In this review we consider the current state of knowledge regarding these molecules, their synthesis, function, and association with cancer. We will also review some of the challenges that remain to be resolved if this emerging class of RNAs are really to become useful in the clinic.
引用
收藏
页码:90 / 99
页数:10
相关论文
共 184 条
[1]   Circular RNAs in monkey muscle: age-dependent changes [J].
Abdelmohsen, Kotb ;
Panda, Amaresh C. ;
De, Supriyo ;
Grammatikakis, Ioannis ;
Kim, Jiyoung ;
Ding, Jun ;
Noh, Ji Heon ;
Kim, Kyoung Mi ;
Mattison, Julie A. ;
de Cabo, Rafael ;
Gorospe, Myriam .
AGING-US, 2015, 7 (11) :903-910
[2]   Rolling Circle Translation of Circular RNA in Living Human Cells [J].
Abe, Naoko ;
Matsumoto, Ken ;
Nishihara, Mizuki ;
Nakano, Yukiko ;
Shibata, Aya ;
Maruyama, Hideto ;
Shuto, Satoshi ;
Matsuda, Akira ;
Yoshida, Minoru ;
Ito, Yoshihiro ;
Abe, Hiroshi .
SCIENTIFIC REPORTS, 2015, 5
[3]   DHX9 suppresses RNA processing defects originating from the Alu invasion of the human genome [J].
Aktas, Tugce ;
Ilik, Ibrahim Avsar ;
Maticzka, Daniel ;
Bhardwaj, Vivek ;
Rodrigues, Cecilia Pessoa ;
Mittler, Gerhard ;
Manke, Thomas ;
Backofen, Rolf ;
Akhtar, Asifa .
NATURE, 2017, 544 (7648) :115-+
[4]  
[Anonymous], 2018, J NATL CANC I
[5]   circRNA Biogenesis Competes with Pre-mRNA Splicing [J].
Ashwal-Fluss, Reut ;
Meyer, Markus ;
Pamudurti, Nagarjuna Reddy ;
Ivanov, Andranik ;
Bartok, Osnat ;
Hanan, Mor ;
Evantal, Naveh ;
Memczak, Sebastian ;
Rajewsky, Nikolaus ;
Kadener, Sebastian .
MOLECULAR CELL, 2014, 56 (01) :55-66
[6]   The Landscape of MicroRNA, Piwi-Interacting RNA, and Circular RNA in Human Saliva [J].
Bahn, Jae Hoon ;
Zhang, Qing ;
Li, Feng ;
Chan, Tak-Ming ;
Lin, Xianzhi ;
Kim, Yong ;
Wong, David T. W. ;
Xiao, Xinshu .
CLINICAL CHEMISTRY, 2015, 61 (01) :221-230
[7]   Circular RNA biogenesis can proceed through an exon-containing lariat precursor [J].
Barrett, Steven P. ;
Wang, Peter L. ;
Salzman, Julia .
ELIFE, 2015, 4 :1-18
[8]   Serum and tissue markers in hepatocellular carcinoma and cholangiocarcinoma: clinical and prognostic implications [J].
Berretta, Massimiliano ;
Cavaliere, Carla ;
Alessandrini, Lara ;
Stanzione, Brigida ;
Facchini, Gaetano ;
Balestreri, Luca ;
Perin, Tiziana ;
Canzonieri, Vincenzo .
ONCOTARGET, 2017, 8 (08) :14192-14220
[9]   TDP-43: new aspects of autoregulation mechanisms in RNA binding proteins and their connection with human disease [J].
Buratti, Emanuele ;
Baralle, Francisco E. .
FEBS JOURNAL, 2011, 278 (19) :3530-3538
[10]   Expression of Linear and Novel Circular Forms of an INK4/ARF-Associated Non-Coding RNA Correlates with Atherosclerosis Risk [J].
Burd, Christin E. ;
Jeck, William R. ;
Liu, Yan ;
Sanoff, Hanna K. ;
Wang, Zefeng ;
Sharpless, Norman E. .
PLOS GENETICS, 2010, 6 (12) :1-15