Cancer Biomarkers and Big Data: A Planetary Science Approach

被引：16

作者：

Crichton, Daniel J. ^{[1
]}

Altinok, Alphan ^{[1
]}

Amos, Christopher I. ^{[2
]}

Anton, Kristen ^{[3
]}

Cinquini, Luca ^{[1
]}

Colbert, Maureen ^{[3
]}

Feng, Ziding ^{[4
]}

Goel, Ajay ^{[5
]}

Kelly, Sean ^{[1
]}

Kincaid, Heather ^{[1
]}

Liu, David ^{[1
]}

Lombeyda, Santiago ^{[6
]}

Mahabal, Ashish ^{[6
]}

Mishra, Asitang ^{[1
]}

Patriotis, Christos ^{[7
]}

Srivastava, Sudhir ^{[7
]}

机构：

[1] CALTECH, Jet Prop Lab, 4800 Oak Grove Dr, Pasadena, CA 91109 USA

[2] Baylor Coll Med, Inst Clin & Translat Res, Houston, TX 77030 USA

[3] Univ N Carolina, Chapel Hill, NC 27599 USA

[4] Fred Hutchinson Canc Res Ctr, Seattle, WA 98109 USA

[5] City Hope Natl Med Ctr, Duarte, CA 91010 USA

[6] CALTECH, Pasadena, CA 91125 USA

[7] NCI, Rockville, MD 20850 USA

来源：

CANCER CELL | 2020年 / 38卷 / 06期

关键词：

D O I：

10.1016/j.ccell.2020.09.006

中图分类号：

R73 [肿瘤学];

学科分类号：

100214 ;

摘要：

Cancer biomarker research has become a data-intensive discipline requiring innovative approaches for data analysis that can combine traditional and data-driven methods. Significant leveraging can be done transferring methodologies and capabilities across scientific disciplines, such as planetary science and astronomy, each of which are grappling with and developing similar solutions for the analysis of massive scientific data.

引用

页码：757 / 760

页数：4

共 14 条

[1]

Crichton D., 2017, P SOC PHOTO-OPT INS, P84

[2] A Scalable Planetary Science Information Architecture for Big Science Data [J].

Crichton, Daniel ;

Hughes, John S. ;

Hardman, Sean ;

Law, Emily ;

Beebe, Reta ;

Morgan, Thomas ;

Grayzeck, Edwin .

2014 IEEE 10TH INTERNATIONAL CONFERENCE ON E-SCIENCE (E-SCIENCE), VOL 1, 2014, :196-203

[3] Bioinformatics: Biomarkers of early detection [J].

Crichton, Daniel J. ;

Mattmann, Chris A. ;

Thornquist, Mark ;

Anton, Kristen ;

Hughes, J. Steven .

CANCER BIOMARKERS, 2011, 9 (1-6) :511-530

[4] Astrogenomics: big data, old problems, old solutions? [J].

Golden, Aaron ;

Djorgovski, S. George ;

Greally, John M. .

GENOME BIOLOGY, 2013, 14 (08) :129

[5]

Lombeyda S, 2019, P ACM SIGGRAPH 2019

[6] Overdiagnosis in Low-Dose Computed Tomography Screening for Lung Cancer [J].

Patz, Edward F., Jr. ;

Pinsky, Paul ;

Gatsonis, Constantine ;

Sicks, JoRean D. ;

Kramer, Barnett S. ;

Tammemaegi, Martin C. ;

Chiles, Caroline ;

Black, William C. ;

Aberle, Denise R. .

JAMA INTERNAL MEDICINE, 2014, 174 (02) :269-274

[7]

Paul R., 2018, P INT JOINT C NEUR N

[8] Summarizing performance for genome scale measurement of miRNA: reference samples and metrics [J].

Pine, P. Scott ;

Lund, Steven P. ;

Parsons, Jerod R. ;

Vang, Lindsay K. ;

Mahabal, Ashish A. ;

Cinquini, Luca ;

Kelly, Sean C. ;

Kincaid, Heather ;

Crichton, Daniel J. ;

Spira, Avrum ;

Liu, Gang ;

Gower, Adam C. ;

Pass, Harvey I. ;

Goparaju, Chandra ;

Dubinett, Steven M. ;

Krysan, Kostyantyn ;

Stass, Sanford A. ;

Kukuruga, Debra ;

Van Keuren-Jensen, Kendall ;

Courtright-Lim, Amanda ;

Thompson, Karol L. ;

Rosenzweig, Barry A. ;

Sorbara, Lynn ;

Srivastava, Sudhir ;

Salit, Marc L. .

BMC GENOMICS, 2018, 19

[9]

Prather Edward E., 2013, Astronomy Education Review, V12, DOI 10.3847/AER2013002

[10] The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution [J].

Rozenblatt-Rosen, Orit ;

Regev, Aviv ;

Oberdoerffer, Philipp ;

Nawy, Tal ;

Hupalowska, Anna ;

Rood, Jennifer E. ;

Ashenberg, Orr ;

Cerami, Ethan ;

Coffey, Robert J. ;

Demir, Emek ;

Ding, Li ;

Esplin, Edward D. ;

Ford, James M. ;

Goecks, Jeremy ;

Ghosh, Sharmistha ;

Gray, Joe W. ;

Guinney, Justin ;

Hanlon, Sean E. ;

Hughes, Shannon K. ;

Hwang, E. Shelley ;

Iacobuzio-Donahue, Christine A. ;

Jane-Valbuena, Judit ;

Johnson, Bruce E. ;

Lau, Ken S. ;

Lively, Tracy ;

Mazzilli, Sarah A. ;

Pe'er, Dana ;

Santagata, Sandro ;

Shalek, Alex K. ;

Schapiro, Denis ;

Snyder, Michael P. ;

Sorger, Peter K. ;

Spira, Avrum E. ;

Srivastava, Sudhir ;

Tan, Kai ;

West, Robert B. ;

Williams, Elizabeth H. .

CELL, 2020, 181 (02) :236-249

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