Selective 1H-1H Distance Restraints in Fully Protonated Proteins by Very Fast Magic-Angle Spinning Solid-State NMR

被引:53
作者
Jain, Mukul G. [1 ]
Lalli, Daniela [2 ]
Stanek, Jan [2 ]
Gowda, Chandrakala [1 ]
Prakash, Satya [1 ]
Schwarzer, Tom S. [3 ]
Schubeis, Tobias [2 ]
Castiglione, Kathrin [3 ]
Andreas, Loren B. [4 ]
Madhu, P. K. [1 ,5 ]
Pintacuda, Guido [2 ]
Agarwal, Vipin [1 ]
机构
[1] Tata Inst Fundamental Res, TIFR Ctr Interdisciplinary Sci, 21 Brundavan Colony, Hyderabad 500075, Andhra Prades, India
[2] UCB Lyon 1, UMR 5280, ENS Lyon,CNRS, Ctr RMN Tres Hauts Champs,Inst Sci Analyt, 5 Rue Doua, F-69100 Villeurbanne, France
[3] Tech Univ Munich, Inst Biochem Engn, Boltzmannstr 15, D-85748 Garching, Germany
[4] Max Planck Inst Biophys Chem, Fassberg 11, D-37077 Gottingen, Germany
[5] Tata Inst Fundamental Res, Dept Chem Sci, Homi Bhabha Rd, Bombay 400005, Maharashtra, India
来源
JOURNAL OF PHYSICAL CHEMISTRY LETTERS | 2017年 / 8卷 / 11期
基金
欧洲研究理事会;
关键词
MAGNETIC-RESONANCE; AMYLOID FIBRILS; SPECTROSCOPY; ASSIGNMENT; RESOLUTION; DIFFUSION; GB1;
D O I
10.1021/acs.jpclett.7b00983
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Very fast magic-angle spinning (MAS > 80 kHz) NMR combined with high-field magnets has enabled the acquisition of proton-detected spectra in fully protonated solid samples with sufficient resolution and sensitivity. One of the primary challenges in structure determination of protein is observing long-range H-1-H-1 contacts. Here we use band-selective spin-lock pulses to obtain selective H-1-H-1 contacts (e.g., H-N-H-N) on the order of 5-6 angstrom in fully protonated proteins at 111 kHz MAS. This approach is a major advancement in structural characterization of proteins given that magnetization can be selectively transferred between protons that are 5-6 angstrom apart despite the presence of other protons at shorter distance. The observed contacts are similar to those previously observed only in perdeuterated proteins with selective protonation. Simulations and experiments show the proposed method has performance that is superior to that of the currently used methods. The method is demonstrated on GB1 and a beta-barrel membrane protein, AlkL.
引用
收藏
页码:2399 / 2405
页数:7
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