Fungal communities in Scandinavian lakes along a longitudinal gradient

被引:36
作者
Khomich, Maryia [1 ,2 ]
Davey, Marie L. [2 ]
Kauserud, Havard [2 ]
Rasconi, Serena [3 ]
Andersen, Tom [1 ]
机构
[1] Univ Oslo, Dept Biosci, Sect Aquat Biol & Toxicol, POB 1066 Blindern, N-0316 Oslo, Norway
[2] Univ Oslo, Dept Biosci, Sect Genet & Evolutionary Biol, POB 1066 Blindern, N-0316 Oslo, Norway
[3] Interuniv Ctr Aquat Ecosyst Res, WasserCluster Biol Stn Lunz, A-3293 Lunz Am See, Austria
关键词
Aquatic fungi; Chytridiomycota; ITS region; Freshwater; Diversity; 454; pyrosequencing; FRESH-WATER FUNGI; MOLECULAR PHYLOGENY; MARINE FUNGI; SP-NOV; DIVERSITY; PHYTOPLANKTON; ECOLOGY; CHYTRIDIOMYCOTA; CLASSIFICATION; IDENTIFICATION;
D O I
10.1016/j.funeco.2017.01.008
中图分类号
Q14 [生态学(生物生态学)];
学科分类号
071012 ; 0713 ;
摘要
This study investigates the diversity and distribution of fungal communities in 77 oligotrophic lakes in southern Norway and Sweden using 454-sequencing with fungal-specific primers targeting ITS2 region of the rRNA gene. A total of 232 operational taxonomic units (OTUs) belonging to four recognized phyla were detected. A large proportion (70.69%) of the detected OTUs were Dikarya (Ascomycota and Basidiomycota), while Chytridiomycota dominated quantitatively (63.37% reads). The most abundant aquatic fungi were taxonomically assigned to Chytridiomycota, whose members are known to be saprobes on a large variety of substrates and parasites of phytoplankton, zooplankton, fungi and invertebrates, suggesting that resident fungi strictly depend on surfaces and, therefore, are closely associated with other types of aquatic organisms. Our results indicate that surface waters of oligotrophic lakes harbour a diverse pool of fungi, both with tentative terrestrial and true aquatic origin. Longitude and environmental factors were important in structuring the fungal community composition. (C) 2017 Elsevier Ltd and British Mycological Society. All rights reserved.
引用
收藏
页码:36 / 46
页数:11
相关论文
共 111 条
  • [61] Cystofilobasidium lacus-mascardii sp nov., a basidiomycetous yeast species isolated from aquatic environments of the Patagonian Andes, and Cystofilobasidium macerans sp nov., the sexual stage of Cryptococcus macerans
    Linkind, Diego
    Gadanho, Mario
    van Broock, Maria
    Sampaio, Jose Paulo
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2009, 59 : 622 - 630
  • [62] Liu H., 2008, SOMMERFELTIA, V32, P1
  • [63] Maharachchikumbura SSN, 2015, FUNGAL DIVERS, V72, P199, DOI [10.1007/s13225-016-0369-6, 10.1007/s13225-015-0331-z]
  • [64] Short-term dynamics of diversity patterns: evidence of continual reassembly within lacustrine small eukaryotes
    Mangot, Jean-Francois
    Domaizon, Isabelle
    Taib, Najwa
    Marouni, Nemr
    Duffaud, Emilie
    Bronner, Gisele
    Debroas, Didier
    [J]. ENVIRONMENTAL MICROBIOLOGY, 2013, 15 (06) : 1745 - 1758
  • [65] AN EVALUATION OF THE RELATIVE ROBUSTNESS OF TECHNIQUES FOR ECOLOGICAL ORDINATION
    MINCHIN, PR
    [J]. VEGETATIO, 1987, 69 (1-3): : 89 - 107
  • [66] Exploring and quantifying fungal diversity in freshwater lake ecosystems using rDNA cloning/sequencing and SSU tag pyrosequencing
    Monchy, Sebastien
    Sanciu, Giovanna
    Jobard, Marlene
    Rasconi, Serena
    Gerphagnon, Melanie
    Chabe, Magali
    Cian, Amandine
    Meloni, Dionigia
    Niquil, Nathalie
    Christaki, Urania
    Viscogliosi, Eric
    Sime-Ngando, Telesphore
    [J]. ENVIRONMENTAL MICROBIOLOGY, 2011, 13 (06) : 1433 - 1453
  • [67] Arctic fungal communities associated with roots of Bistorta vivipara do not respond to the same fine-scale edaphic gradients as the aboveground vegetation
    Mundra, Sunil
    Halvorsen, Rune
    Kauserud, Havard
    Muller, Eike
    Vik, Unni
    Eidesen, Pernille B.
    [J]. NEW PHYTOLOGIST, 2015, 205 (04) : 1587 - 1597
  • [68] Nagahama T, 2006, BIODIVERSITY AND ECOPHYSIOLOGY OF YEASTS, P241, DOI 10.1007/3-540-30985-3_12
  • [69] Rhodotorula benthica sp nov and Rhodotorula calyptogenae sp nov., novel yeast species from animals collected from the deep-sea floor, and Rhodotorula lysiniphila sp nov., which is related phylogenetically
    Nagahama, T
    Hamamoto, M
    Nakase, T
    Horikoshi, K
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2003, 53 : 897 - 903
  • [70] Nilsson RH, 2008, EVOL BIOINFORM, V4, P193