Fungal communities in Scandinavian lakes along a longitudinal gradient

被引:39
作者
Khomich, Maryia [1 ,2 ]
Davey, Marie L. [2 ]
Kauserud, Havard [2 ]
Rasconi, Serena [3 ]
Andersen, Tom [1 ]
机构
[1] Univ Oslo, Dept Biosci, Sect Aquat Biol & Toxicol, POB 1066 Blindern, N-0316 Oslo, Norway
[2] Univ Oslo, Dept Biosci, Sect Genet & Evolutionary Biol, POB 1066 Blindern, N-0316 Oslo, Norway
[3] Interuniv Ctr Aquat Ecosyst Res, WasserCluster Biol Stn Lunz, A-3293 Lunz Am See, Austria
关键词
Aquatic fungi; Chytridiomycota; ITS region; Freshwater; Diversity; 454; pyrosequencing; FRESH-WATER FUNGI; MOLECULAR PHYLOGENY; MARINE FUNGI; SP-NOV; DIVERSITY; PHYTOPLANKTON; ECOLOGY; CHYTRIDIOMYCOTA; CLASSIFICATION; IDENTIFICATION;
D O I
10.1016/j.funeco.2017.01.008
中图分类号
Q14 [生态学(生物生态学)];
学科分类号
071012 ; 0713 ;
摘要
This study investigates the diversity and distribution of fungal communities in 77 oligotrophic lakes in southern Norway and Sweden using 454-sequencing with fungal-specific primers targeting ITS2 region of the rRNA gene. A total of 232 operational taxonomic units (OTUs) belonging to four recognized phyla were detected. A large proportion (70.69%) of the detected OTUs were Dikarya (Ascomycota and Basidiomycota), while Chytridiomycota dominated quantitatively (63.37% reads). The most abundant aquatic fungi were taxonomically assigned to Chytridiomycota, whose members are known to be saprobes on a large variety of substrates and parasites of phytoplankton, zooplankton, fungi and invertebrates, suggesting that resident fungi strictly depend on surfaces and, therefore, are closely associated with other types of aquatic organisms. Our results indicate that surface waters of oligotrophic lakes harbour a diverse pool of fungi, both with tentative terrestrial and true aquatic origin. Longitude and environmental factors were important in structuring the fungal community composition. (C) 2017 Elsevier Ltd and British Mycological Society. All rights reserved.
引用
收藏
页码:36 / 46
页数:11
相关论文
共 111 条
[101]   Global biogeography of marine fungi is shaped by the environment [J].
Tisthammer, Kaho H. ;
Cobian, Gerald Manuel ;
Amend, Anthony Stuart .
FUNGAL ECOLOGY, 2016, 19 :39-46
[102]   OCCURRENCE AND POPULATION DENSITIES OF YEAST SPECIES IN A FRESH-WATER LAKE [J].
VANUDEN, N ;
AHEARN, DC .
ANTONIE VAN LEEUWENHOEK JOURNAL OF MICROBIOLOGY AND SEROLOGY, 1963, 29 (03) :308-&
[103]  
Vijaykrishna D, 2006, FUNGAL DIVERS, V21, P203
[104]  
Voigt K., 2013, Agricultural Applications, P243
[105]   Terrigenous micromycetes in freshwater ecosystems (review) [J].
Voronin, L. V. .
INLAND WATER BIOLOGY, 2014, 7 (04) :352-356
[106]   A comprehensive molecular phylogeny of the Mortierellales (Mortierellomycotina) based on nuclear ribosomal DNA [J].
Wagner, L. ;
Stielow, B. ;
Hoffmann, K. ;
Petkovits, T. ;
Papp, T. ;
Vagvoelgyi, C. ;
de Hoog, G. S. ;
Verkley, G. ;
Voigt, K. .
PERSOONIA, 2013, 30 :77-93
[107]  
White T.J., 1990, PCR protocols: a guide to methods and applications, DOI [10.1016/b978-0-12-372180-8.50042-1, DOI 10.1016/B978-0-12-372180-8.50042-1]
[108]   Naming and outline of Dothideomycetes-2014 including proposals for the protection or suppression of generic names [J].
Wijayawardene, Nalin N. ;
Crous, Pedro W. ;
Kirk, Paul M. ;
Hawksworth, David L. ;
Boonmee, Saranyaphat ;
Braun, Uwe ;
Dai, Dong-Qin ;
D'souza, Melvina J. ;
Diederich, Paul ;
Dissanayake, Asha ;
Doilom, Mingkhuan ;
Hongsanan, Singang ;
Jones, E. B. Gareth ;
Groenewald, Johannes Z. ;
Jayawardena, Ruvishika ;
Lawrey, James D. ;
Liu, Jian-Kui ;
Luecking, Robert ;
Madrid, Hugo ;
Manamgoda, Dimuthu S. ;
Muggia, Lucia ;
Nelsen, Matthew P. ;
Phookamsak, Rungtiwa ;
Suetrong, Satinee ;
Tanaka, Kazuaki ;
Thambugala, Kasun M. ;
Wanasinghe, Dhanushka N. ;
Wikee, Saowanee ;
Zhang, Ying ;
Aptroot, Andre ;
Ariyawansa, H. A. ;
Bahkali, Ali H. ;
Bhat, D. Jayarama ;
Gueidan, Cecile ;
Chomnunti, Putarak ;
De Hoog, G. Sybren ;
Knudsen, Kerry ;
Li, Wen-Jing ;
McKenzie, Eric H. C. ;
Miller, Andrew N. ;
Phillips, Alan J. L. ;
Piatek, Marcin ;
Raja, Huzefa A. ;
Shivas, Roger S. ;
Slippers, Bernad ;
Taylor, Joanne E. ;
Tian, Qing ;
Wang, Yong ;
Woudenberg, Joyce H. C. ;
Cai, Lei .
FUNGAL DIVERSITY, 2014, 69 (01) :1-55
[109]   Importance of Saprotrophic Freshwater Fungi for Pollen Degradation [J].
Wurzbacher, Christian ;
Roesel, Stefan ;
Rychla, Anna ;
Grossart, Hans-Peter .
PLOS ONE, 2014, 9 (04)
[110]   Fungi in lake ecosystems [J].
Wurzbacher, Christian M. ;
Baerlocher, Felix ;
Grossart, Hans-Peter .
AQUATIC MICROBIAL ECOLOGY, 2010, 59 (02) :125-149