The complete chloroplast genome sequence of Indian barnyard millet, Echinochloa frumentacea (Poaceae)

被引：12

作者：

Perumal, Sampath ^{[1
,2
]}

Jayakodi, Murukarthick ^{[1
,2
]}

Kim, Do-Soon ^{[1
,2
]}

Yang, Tae-jin ^{[1
,2
]}

Natesan, Senthil ^{[3
]}

机构：

[1] Seoul Natl Univ, Coll Agr & Life Sci, Plant Genom & Breeding Inst, Dept Plant Sci, Seoul 151921, South Korea

[2] Seoul Natl Univ, Coll Agr & Life Sci, Res Inst Agr & Life Sci, Seoul 151921, South Korea

[3] Tamil Nadu Agr Univ, Agr Coll & Res Inst, Dept Biotechnol, Madurai 625104, Tamil Nadu, India

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2016年 / 1卷 / 01期

关键词：

Chloroplast genome; Echinochloa; E; frumentacea; Indian barnyard millet;

D O I：

10.1080/23802359.2015.1137832

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

We report the complete chloroplast genome sequence of the important nutritious millet crop Indian barnyard millet, Echinochloa frumentacea Link (Poaceae). The size of the circular chloroplast genome is 139 593 bp in length with a typical quadripartite structure, containing pair of inverted repeats of 22 618 bp, flanked by large single copy and small single copy regions of 81 839 bp, 12 518 bp, respectively. Overall GC content of the genome was 38.6% and consists of 112 individual genes, including 77 protein coding genes, 30 tRNA genes, four rRNA genes and one conserved open reading frame. In addition, phylogenetic analysis with grass species has revealed that E. frumentacea is diverged around 1.9-2.7 million years with its close relatives, E. oryzicola and E. crus-galli.

引用

页码：79 / 80

页数：2

共 13 条

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