Epigenetic Alterations in the Gastrointestinal Tract: Current and Emerging Use for Biomarkers of Cancer

被引:157
作者
Grady, William M. [1 ,2 ]
Yu, Ming [1 ]
Markowitz, Sanford D. [3 ]
机构
[1] Fred Hutchinson Canc Res Ctr, Div Clin Res, 1100 Fairview Ave North,D4-100, Seattle, WA 98109 USA
[2] Univ Washington, Sch Med, Div Gastroenterol, Seattle, WA USA
[3] Case Western Reserve Univ, Cleveland, OH 44106 USA
基金
美国国家卫生研究院;
关键词
DNA; Methylation; Noncoding RNA; Chromatin; Histone; Colorectal Cancer; Esophageal Cancer; Gastric Cancer; Pancreatic Cancer; Barrett's Esophagus; Biomarkers; Diagnosis; Prognosis; Predictive; Treatment;
D O I
10.1053/j.gastro.2020.09.058
中图分类号
R57 [消化系及腹部疾病];
学科分类号
摘要
Colorectal cancer, liver cancer, stomach cancer, pancreatic cancer, and esophageal cancer are leading causes of cancer-related deaths worldwide. A fundamental trait of virtually all gastrointestinal cancers is genomic and epigenomic DNA alterations. Cancer cells acquire genetic and epigenetic alterations that drive the initiation and progression of the cancers by altering the molecular and cell biological processes of the cells. These alterations, as well as other host and microenvironment factors, ultimately mediate the clinical behavior of the precancers and cancers and can be used as biomarkers for cancer risk determination, early detection of cancer and precancer, determination of the prognosis of cancer and prediction of the response to therapy. Epigenetic alterations have emerged as one of most robust classes of biomarkers and are the basis for a growing number of clinical tests for cancer screening and surveillance.
引用
收藏
页码:690 / 709
页数:20
相关论文
共 244 条
[41]   Hotspots of aberrant enhancer activity punctuate the colorectal cancer epigenome [J].
Cohen, Andrea J. ;
Saiakhova, Alina ;
Corradin, Olivia ;
Luppino, Jennifer M. ;
Lovrenert, Katreya ;
Bartels, Cynthia F. ;
Morrow, James J. ;
Mack, Stephen C. ;
Dhillon, Gursimran ;
Beard, Lydia ;
Myeroff, Lois ;
Kalady, Matthew F. ;
Willis, Joseph ;
Bradner, James E. ;
Keri, Ruth A. ;
Berger, Nathan A. ;
Pruett-Miller, Shondra M. ;
Markowitz, Sanford D. ;
Scacheri, Peter C. .
NATURE COMMUNICATIONS, 2017, 8
[42]  
Cohen Idan, 2011, Genes Cancer, V2, P631, DOI 10.1177/1947601911417176
[43]   Finishing the euchromatic sequence of the human genome [J].
Collins, FS ;
Lander, ES ;
Rogers, J ;
Waterston, RH .
NATURE, 2004, 431 (7011) :931-945
[44]   Performance of Multitarget Stool DNA Testing in African American Patients [J].
Cooper, Gregory S. ;
Markowitz, Sanford D. ;
Chen, Zhengyi ;
Tuck, Missy ;
Willis, Joseph E. ;
Berger, Barry M. ;
Brenner, Dean E. ;
Li, Li .
CANCER, 2018, 124 (19) :3876-3880
[45]   Terminology, Molecular Features, Epidemiology, and Management of Serrated Colorectal Neoplasia [J].
Crockett, Seth D. ;
Nagtegaal, Iris D. .
GASTROENTEROLOGY, 2019, 157 (04) :949-+
[46]  
Cui HM, 2002, CANCER RES, V62, P6442
[47]   A Molecular Clock Infers Heterogeneous Tissue Age Among Patients with Barrett's Esophagus [J].
Curtius, Kit ;
Wong, Chao-Jen ;
Hazelton, William D. ;
Kaz, Andrew M. ;
Chak, Amitabh ;
Willis, Joseph E. ;
Grady, William M. ;
Luebeck, E. Georg .
PLOS COMPUTATIONAL BIOLOGY, 2016, 12 (05)
[48]   DNA methylation and cancer diagnosis: new methods and applications [J].
Dehan, Pierre ;
Kustermans, Gaelle ;
Guenin, Samuel ;
Horion, Julie ;
Boniver, Jacques ;
Delvenne, Philippe .
EXPERT REVIEW OF MOLECULAR DIAGNOSTICS, 2009, 9 (07) :651-657
[49]   Sessile serrated adenomas and classical adenomas: an epigenetic perspective on premalignant neoplastic lesions of the gastrointestinal tract [J].
Dhir, Mashaal ;
Yachida, Shinichi ;
Van Neste, Leander ;
Gloeckner, Sabine C. ;
Jeschke, Jana ;
Pappou, Emmanouil P. ;
Montgomery, Elizabeth A. ;
Herman, James G. ;
Baylin, Stephen B. ;
Iacobuzio-Donahue, Christine ;
Ahuja, Nita .
INTERNATIONAL JOURNAL OF CANCER, 2011, 129 (08) :1889-1898
[50]   Personalizing Colon Cancer Adjuvant Therapy: Selecting Optimal Treatments for Individual Patients [J].
Dienstmann, Rodrigo ;
Salazar, Ramon ;
Tabernero, Josep .
JOURNAL OF CLINICAL ONCOLOGY, 2015, 33 (16) :1787-+