Complete mitochondrial genome of the hard clam (Mercenaria mercenaria)

被引:5
作者
Hu, Zhi [1 ,2 ,3 ]
Song, Hao [1 ,2 ]
Zhou, Cong [1 ,2 ,3 ]
Yu, Zheng-Lin [1 ,2 ]
Yang, Mei-Jie [1 ,2 ,3 ]
Zhang, Tao [1 ,2 ,4 ]
机构
[1] Chinese Acad Sci, Inst Oceanol, CAS Key Lab Marine Ecol & Environm Sci, Qingdao, Shandong, Peoples R China
[2] Qingdao Pilot Natl Lab Marine Sci & Technol, Lab Marine Ecol & Environm Sci, Qingdao, Shandong, Peoples R China
[3] Univ Chinese Acad Sci, Beijing, Peoples R China
[4] Chinese Acad Sci, Ctr Ocean Mega Sci, Qingdao, Shandong, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 02期
关键词
Mercenaria mercenaria; Venreidae; mitogenome; PHYLOGENY; MOLLUSCA;
D O I
10.1080/23802359.2019.1681306
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The hard clam (Mercenaria mercenaria) is an important economic and ecological bivalve. In this study, the mitochondrial genome was sequenced. The sequenced genome size was 18,360?bp. The nucleotide composition was asymmetric with a AT bias. Mitogenome contained 13 protein-coding genes (PCGs), 2 rRNA genes, and 22 tRNA genes. Of 13 PCGs, 3 genes (cox3, nad3, and cox2) had incomplete stop codons. Furthermore, phylogenetic analysis using 12 PCGs (except atp8) figured out that M. mercenaria was closely related to genus Dosinia. The complete mitogenome of M. mercenaria provides essential information for further phylogenetic and evolutionary analysis in Veneridae.
引用
收藏
页码:3738 / 3739
页数:2
相关论文
共 7 条
[1]   Molecular data from the 16S rRNA gene for the phylogeny of Veneridae (Mollusca: Bivalvia) [J].
Canapa, A ;
Schiaparelli, S ;
Marota, I ;
Barucca, M .
MARINE BIOLOGY, 2003, 142 (06) :1125-1130
[2]   The complete mitochondrial genome of the hard clam Meretrix meretrix [J].
He, Chong-bo ;
Wang, Jian ;
Gao, Xiang-gang ;
Song, Wen-tao ;
Li, Hong-jun ;
Li, Yun-feng ;
Liu, Wei-dong ;
Su, Hao .
MOLECULAR BIOLOGY REPORTS, 2011, 38 (05) :3401-3409
[3]  
Kumar S, 2016, MOL BIOL EVOL, V33, P1870, DOI [10.1093/molbev/msw054, 10.1093/molbev/msv279]
[4]   Comparative analyses of the complete mitochondrial genomes of Dosinia clams and their phylogenetic position within Veneridae [J].
Lv, Changda ;
Li, Qi ;
Kong, Lingfeng .
PLOS ONE, 2018, 13 (05)
[5]  
Menzel R, 1971, P ANN WORKSHOP WOR, P21, DOI DOI 10.1111/J.1749-7345.1971.TB00029.X
[6]   Phylogeny of Veneroidea (Mollusca: Bivalvia) based on morphology and molecules [J].
Mikkelsen, Paula M. ;
Bieler, Rudiger ;
Kappner, Isabella ;
Rawlings, Timothy A. .
ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY, 2006, 148 (03) :439-521
[7]   TRANSFER-RNA PUNCTUATION MODEL OF RNA PROCESSING IN HUMAN MITOCHONDRIA [J].
OJALA, D ;
MONTOYA, J ;
ATTARDI, G .
NATURE, 1981, 290 (5806) :470-474