Helminth Genomics: The Implications for Human Health

被引:67
作者
Brindley, Paul J. [1 ]
Mitreva, Makedonka [2 ,3 ]
Ghedin, Elodie [4 ]
Lustigman, Sara [5 ]
机构
[1] George Washington Univ, Med Ctr, Dept Microbiol Immunol & Trop Med, Washington, DC 20037 USA
[2] Washington Univ, Sch Med, Dept Genet, St Louis, MO 63110 USA
[3] Washington Univ, Sch Med, Genome Ctr, St Louis, MO 63110 USA
[4] Univ Pittsburgh, Sch Med, Div Infect Dis, Pittsburgh, PA USA
[5] New York Blood Ctr, Mol Parasitol Lab, New York, NY 10021 USA
关键词
NEGLECTED TROPICAL DISEASES; TRICHURIS-SUIS THERAPY; GROWTH-FACTOR-BETA; SCHISTOSOMA-MANSONI; FILARIAL NEMATODE; BRUGIA-MALAYI; PHYLUM NEMATODA; GENE-EXPRESSION; STRONGYLOIDES-STERCORALIS; TRICHINELLA-SPIRALIS;
D O I
10.1371/journal.pntd.0000538
中图分类号
R51 [传染病];
学科分类号
100401 ;
摘要
More than two billion people (one-third of humanity) are infected with parasitic roundworms or flatworms, collectively known as helminth parasites. These infections cause diseases that are responsible for enormous levels of morbidity and mortality, delays in the physical development of children, loss of productivity among the workforce, and maintenance of poverty. Genomes of the major helminth species that affect humans, and many others of agricultural and veterinary significance, are now the subject of intensive genome sequencing and annotation. Draft genome sequences of the filarial worm Brugia malayi and two of the human schistosomes, Schistosoma japonicum and S. mansoni, are now available, among others. These genome data will provide the basis for a comprehensive understanding of the molecular mechanisms involved in helminth nutrition and metabolism, host-dependent development and maturation, immune evasion, and evolution. They are likely also to predict new potential vaccine candidates and drug targets. In this review, we present an overview of these efforts and emphasize the potential impact and importance of these new findings.
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相关论文
共 95 条
[1]   Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita [J].
Abad, Pierre ;
Gouzy, Jerome ;
Aury, Jean-Marc ;
Castagnone-Sereno, Philippe ;
Danchin, Etienne G. J. ;
Deleury, Emeline ;
Perfus-Barbeoch, Laetitia ;
Anthouard, Veronique ;
Artiguenave, Francois ;
Blok, Vivian C. ;
Caillaud, Marie-Cecile ;
Coutinho, Pedro M. ;
Dasilva, Corinne ;
De Luca, Francesca ;
Deau, Florence ;
Esquibet, Magali ;
Flutre, Timothe ;
Goldstone, Jared V. ;
Hamamouch, Noureddine ;
Hewezi, Tarek ;
Jaillon, Olivier ;
Jubin, Claire ;
Leonetti, Paola ;
Magliano, Marc ;
Maier, Tom R. ;
Markov, Gabriel V. ;
McVeigh, Paul ;
Pesole, Graziano ;
Poulain, Julie ;
Robinson-Rechavi, Marc ;
Sallet, Erika ;
Segurens, Beatrice ;
Steinbach, Delphine ;
Tytgat, Tom ;
Ugarte, Edgardo ;
van Ghelder, Cyril ;
Veronico, Pasqua ;
Baum, Thomas J. ;
Blaxter, Mark ;
Bleve-Zacheo, Teresa ;
Davis, Eric L. ;
Ewbank, Jonathan J. ;
Favery, Bruno ;
Grenier, Eric ;
Henrissat, Bernard ;
Jones, John T. ;
Laudet, Vincent ;
Maule, Aaron G. ;
Quesneville, Hadi ;
Rosso, Marie-Noelle .
NATURE BIOTECHNOLOGY, 2008, 26 (08) :909-915
[2]   The canine hookworm genome:: Analysis and classification of Ancylostoma caninum survey sequences [J].
Abubucker, Sahar ;
Martin, John ;
Yin, Yong ;
Fulton, Lucinda ;
Yang, Shiaw-Pyng ;
Hallsworth-Pepin, Kym ;
Johnston, J. Spencer ;
Hawdon, John ;
McCarter, James P. ;
Wilson, Richard K. ;
Mitreva, Makedonka .
MOLECULAR AND BIOCHEMICAL PARASITOLOGY, 2008, 157 (02) :187-192
[3]   Solexa Ltd [J].
Bennett, S .
PHARMACOGENOMICS, 2004, 5 (04) :433-438
[4]   Helminth initiative for drug discovery - report of the informal consultation, genomics and emerging drug discovery technologies [J].
Berriman, Matthew ;
Lustigman, Sara ;
McCarter, James P. .
EXPERT OPINION ON DRUG DISCOVERY, 2007, 2 :S83-S89
[5]   The genome of the blood fluke Schistosoma mansoni [J].
Berriman, Matthew ;
Haas, Brian J. ;
LoVerde, Philip T. ;
Wilson, R. Alan ;
Dillon, Gary P. ;
Cerqueira, Gustavo C. ;
Mashiyama, Susan T. ;
Al-Lazikani, Bissan ;
Andrade, Luiza F. ;
Ashton, Peter D. ;
Aslett, Martin A. ;
Bartholomeu, Daniella C. ;
Blandin, Gaelle ;
Caffrey, Conor R. ;
Coghlan, Avril ;
Coulson, Richard ;
Day, Tim A. ;
Delcher, Art ;
DeMarco, Ricardo ;
Djikeng, Appolinaire ;
Eyre, Tina ;
Gamble, John A. ;
Ghedin, Elodie ;
Gu, Yong ;
Hertz-Fowler, Christiane ;
Hirai, Hirohisha ;
Hirai, Yuriko ;
Houston, Robin ;
Ivens, Alasdair ;
Johnston, David A. ;
Lacerda, Daniela ;
Macedo, Camila D. ;
McVeigh, Paul ;
Ning, Zemin ;
Oliveira, Guilherme ;
Overington, John P. ;
Parkhill, Julian ;
Pertea, Mihaela ;
Pierce, Raymond J. ;
Protasio, Anna V. ;
Quail, Michael A. ;
Rajandream, Marie-Adele ;
Rogers, Jane ;
Sajid, Mohammed ;
Salzberg, Steven L. ;
Stanke, Mario ;
Tivey, Adrian R. ;
White, Owen ;
Williams, David L. ;
Wortman, Jennifer .
NATURE, 2009, 460 (7253) :352-U65
[6]   A molecular evolutionary framework for the phylum Nematoda [J].
Blaxter, ML ;
De Ley, P ;
Garey, JR ;
Liu, LX ;
Scheldeman, P ;
Vierstraete, A ;
Vanfleteren, JR ;
Mackey, LY ;
Dorris, M ;
Frisse, LM ;
Vida, JT ;
Thomas, WK .
NATURE, 1998, 392 (6671) :71-75
[7]   Genome sequence of the nematode C-elegans:: A platform for investigating biology [J].
不详 .
SCIENCE, 1998, 282 (5396) :2012-2018
[8]   Morphogenesis of Strongyloides stercoralis Infective Larvae Requires the DAF-16 Ortholog FKTF-1 [J].
Castelletto, Michelle L. ;
Massey, Holman C., Jr. ;
Lok, James B. .
PLOS PATHOGENS, 2009, 5 (04)
[9]   Multiple sequence alignment with the Clustal series of programs [J].
Chenna, R ;
Sugawara, H ;
Koike, T ;
Lopez, R ;
Gibson, TJ ;
Higgins, DG ;
Thompson, JD .
NUCLEIC ACIDS RESEARCH, 2003, 31 (13) :3497-3500
[10]   Native chromatin immunoprecipitation (N-ChIP) and ChIP-Seq of Schistosoma mansoni: Critical experimental parameters [J].
Cosseau, Celine ;
Azzi, Abdelhalim ;
Smith, Kristina ;
Freitag, Michael ;
Mitta, Guillaume ;
Grunau, Christoph .
MOLECULAR AND BIOCHEMICAL PARASITOLOGY, 2009, 166 (01) :70-76