The complete mitochondrial genome of the dusky-footed woodrat (Neotoma fuscipes) (Rodentia, Cricetidae)

被引:2
作者
Brown, Sarah K. [1 ]
Blois, Jessica L. [1 ]
机构
[1] Univ Calif Merced, Life & Environm Sci, Sch Nat Sci, Merced, CA 95340 USA
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2016年 / 1卷 / 01期
关键词
Mitochondrial genome; Neotoma fuscipes; cricetidae; DNA-SEQUENCES; ANNOTATION;
D O I
10.1080/23802359.2016.1233464
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The dusky-footed woodrat (Neotoma fuscipes) is an endemic North American rodent belonging to the family Cricetidae. We present here the first complete mitogenome within the Neotoma genus. The mitogenome is 16,199 bp in length, and has a structure and gene organization similar to other rodent species (e.g. Mus musculus, Peromyscus maniculatus and Microtus fortis calamorum). The overall base composition is A (35.2%), C (25.5%), G (12.3%), T (27.0%), with a GC content of 37.8%, similar to other rodents. This mitogenome serves as a foundation for future phylogenetic, phylogeographic and population genetic studies.
引用
收藏
页码:728 / 729
页数:2
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共 13 条
  • [11] Response of bushy-tailed woodrats (Neotoma cinerea) to late Quaternary climatic change in the Colorado Plateau
    Smith, FA
    Betancourt, JL
    [J]. QUATERNARY RESEARCH, 1998, 50 (01) : 1 - 11
  • [12] W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis
    Trifinopoulos, Jana
    Lam-Tung Nguyen
    von Haeseler, Arndt
    Minh, Bui Quang
    [J]. NUCLEIC ACIDS RESEARCH, 2016, 44 (W1) : W232 - W235
  • [13] Automatic annotation of organellar genomes with DOGMA
    Wyman, SK
    Jansen, RK
    Boore, JL
    [J]. BIOINFORMATICS, 2004, 20 (17) : 3252 - 3255