Enhancing grain-yield-related traits by CRISPR-Cas9 promoter editing of maize CLE genes

被引:263
作者
Liu, Lei [1 ]
Gallagher, Joseph [2 ]
Arevalo, Edgar Demesa [1 ]
Chen, Richelle [1 ]
Skopelitis, Tara [1 ]
Wu, Qingyu [1 ,3 ]
Bartlett, Madelaine [2 ]
Jackson, David [1 ]
机构
[1] Cold Spring Harbor Lab, POB 100, Cold Spring Harbor, NY 11724 USA
[2] Univ Massachusetts, Biol Dept, Amherst, MA 01003 USA
[3] Chinese Acad Agr Sci, Inst Agr Resources & Reg Planning, Beijing, Peoples R China
基金
美国国家科学基金会;
关键词
RECEPTOR-LIKE PROTEIN; POSTDOMESTICATION SPREAD; SHOOT; ARABIDOPSIS; ENCODES; DOMESTICATION; POPULATION; SELECTION; SOFTWARE; GENETICS;
D O I
10.1038/s41477-021-00858-5
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Several yield-related traits selected during crop domestication and improvement(1,2) are associated with increases in meristem size(3), which is controlled by CLE peptide signals in the CLAVATA-WUSCHEL pathway(4-13). Here, we engineered quantitative variation for yield-related traits in maize by making weak promoter alleles of CLE genes, and a null allele of a newly identified partially redundant compensating CLE gene, using CRISPR-Cas9 genome editing. These strategies increased multiple maize grain-yield-related traits, supporting the enormous potential for genomic editing in crop enhancement.
引用
收藏
页码:287 / +
页数:10
相关论文
共 53 条
[1]   Trimmomatic: a flexible trimmer for Illumina sequence data [J].
Bolger, Anthony M. ;
Lohse, Marc ;
Usadel, Bjoern .
BIOINFORMATICS, 2014, 30 (15) :2114-2120
[2]   thick tassel dwarf1 encodes a putative maize ortholog of the Arabidopsis CLAVATA1 leucine-rich repeat receptor-like kinase [J].
Bommert, P ;
Lunde, C ;
Nardmann, J ;
Vollbrecht, E ;
Running, M ;
Jackson, D ;
Hake, S ;
Werr, W .
DEVELOPMENT, 2005, 132 (06) :1235-1245
[3]   Quantitative variation in maize kernel row number is controlled by the FASCIATED EAR2 locus [J].
Bommert, Peter ;
Nagasawa, Namiko Satoh ;
Jackson, David .
NATURE GENETICS, 2013, 45 (03) :334-337
[4]   TASSEL: software for association mapping of complex traits in diverse samples [J].
Bradbury, Peter J. ;
Zhang, Zhiwu ;
Kroon, Dallas E. ;
Casstevens, Terry M. ;
Ramdoss, Yogesh ;
Buckler, Edward S. .
BIOINFORMATICS, 2007, 23 (19) :2633-2635
[5]   Dependence of stem cell fate in Arabidopsis an a feedback loop regulated by CLV3 activity [J].
Brand, U ;
Fletcher, JC ;
Hobe, M ;
Meyerowitz, EM ;
Simon, R .
SCIENCE, 2000, 289 (5479) :617-619
[6]   Distinct Genetic Architectures for Male and Female Inflorescence Traits of Maize [J].
Brown, Patrick J. ;
Upadyayula, Narasimham ;
Mahone, Gregory S. ;
Tian, Feng ;
Bradbury, Peter J. ;
Myles, Sean ;
Holland, James B. ;
Flint-Garcia, Sherry ;
McMullen, Michael D. ;
Buckler, Edward S. ;
Rocheford, Torbert R. .
PLOS GENETICS, 2011, 7 (11)
[7]   An Agrobacterium-delivered CRISPR/Cas9 system for high-frequency targeted mutagenesis in maize [J].
Char, Si Nian ;
Neelakandan, Anjanasree K. ;
Nahampun, Hartinio ;
Frame, Bronwyn ;
Main, Marcy ;
Spalding, Martin H. ;
Becraft, Philip W. ;
Meyers, Blake C. ;
Walbot, Virginia ;
Wang, Kan ;
Yang, Bing .
PLANT BIOTECHNOLOGY JOURNAL, 2017, 15 (02) :257-268
[8]   The CLAVATA1 gene encodes a putative receptor kinase that controls shoot and floral meristem size in Arabidopsis [J].
Clark, SE ;
Williams, RW ;
Meyerowitz, EM .
CELL, 1997, 89 (04) :575-585
[9]   Distribution and intensity of constraint in mammalian genomic sequence [J].
Cooper, GM ;
Stone, EA ;
Asimenos, G ;
Green, ED ;
Batzoglou, S ;
Sidow, A .
GENOME RESEARCH, 2005, 15 (07) :901-913
[10]   A SELECTION PROCEDURE FOR EAR DRYING-RATES IN MAIZE [J].
CROSS, HZ .
EUPHYTICA, 1985, 34 (02) :409-418