Cell-based high-throughput screening of polysaccharide biosynthesis hosts

被引:5
作者
Liu, Zi-Xu [1 ]
Huang, Si-Ling [2 ]
Hou, Jin [3 ]
Guo, Xue-Ping [2 ]
Wang, Feng-Shan [1 ,4 ]
Sheng, Ju-Zheng [1 ,4 ]
机构
[1] Shandong Univ, Key Lab Chem Biol Nat Prod, Inst Biochem & Biotechnol Drug, Minist Educ,Sch Pharmaceut Sci,Cheeloo Coll Med, Jinan 250012, Peoples R China
[2] Bloomage BioTechnol Corp Ltd, Jinan 250010, Peoples R China
[3] Shandong Univ, State Key Lab Microbial Technol, Jinan 250100, Peoples R China
[4] Shandong Univ, Natl Glycoengn Res Ctr, Jinan 250012, Peoples R China
基金
中国国家自然科学基金;
关键词
Polysaccharide; Glycosyltransferase; High-throughput screening; Fluorescently-labeled substrate; Biosensor;
D O I
10.1186/s12934-021-01555-w
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Valuable polysaccharides are usually produced using wild-type or metabolically-engineered host microbial strains through fermentation. These hosts act as cell factories that convert carbohydrates, such as monosaccharides or starch, into bioactive polysaccharides. It is desirable to develop effective in vivo high-throughput approaches to screen cells that display high-level synthesis of the desired polysaccharides. Uses of single or dual fluorophore labeling, fluorescence quenching, or biosensors are effective strategies for cell sorting of a library that can be applied during the domestication of industrial engineered strains and metabolic pathway optimization of polysaccharide synthesis in engineered cells. Meanwhile, high-throughput screening strategies using each individual whole cell as a sorting section are playing growing roles in the discovery and directed evolution of enzymes involved in polysaccharide biosynthesis, such as glycosyltransferases. These enzymes and their mutants are in high demand as tool catalysts for synthesis of saccharides in vitro and in vivo. This review provides an introduction to the methodologies of using cell-based high-throughput screening for desired polysaccharide-biosynthesizing cells, followed by a brief discussion of potential applications of these approaches in glycoengineering.
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页数:10
相关论文
共 64 条
[1]   High-throughput screening methodology for the directed evolution of glycosyltransferases [J].
Aharoni, Amir ;
Thieme, Karena ;
Chiu, Cecilia P. C. ;
Buchini, Sabrina ;
Lairson, Luke L. ;
Chen, Hongming ;
Strynadka, Natalie C. J. ;
Wakarchuk, Warren W. ;
Withers, Stephen G. .
NATURE METHODS, 2006, 3 (08) :609-614
[2]   Effect of protein, polysaccharide, and oxygen concentration profiles on biofilm cohesiveness [J].
Ahimou, Francois ;
Semmens, Michael J. ;
Haugstad, Greg ;
Novak, Paige J. .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2007, 73 (09) :2905-2910
[3]   Advances in laboratory evolution of enzymes [J].
Bershtein, Shimon ;
Tawfik, Dan S. .
CURRENT OPINION IN CHEMICAL BIOLOGY, 2008, 12 (02) :151-158
[4]   Glycosynthesis in a waterworld: new insight into the molecular basis of transglycosylation in retaining glycoside hydrolases [J].
Bissaro, Bastien ;
Monsan, Pierre ;
Faure, Regis ;
O'Donohue, Michael J. .
BIOCHEMICAL JOURNAL, 2015, 467 :17-35
[5]  
Boltje TJ, 2009, NAT CHEM, V1, P611, DOI [10.1038/nchem.399, 10.1038/NCHEM.399]
[6]   Assessing mitochondrial dysfunction in cells [J].
Brand, Martin D. ;
Nicholls, David G. .
BIOCHEMICAL JOURNAL, 2011, 435 :297-312
[7]   Extracellular polysaccharide composition of Azospirillum brasilense and its relation with cell aggregation [J].
Burdman, S ;
Jurkevitch, E ;
Soria-Díaz, ME ;
Serrano, AMG ;
Okon, Y .
FEMS MICROBIOLOGY LETTERS, 2000, 189 (02) :259-264
[8]   Glycosyltransferase structural biology and its role in the design of catalysts for glycosylation [J].
Chang, Aram ;
Singh, Shanteri ;
Phillips, George N., Jr. ;
Thorson, Jon S. .
CURRENT OPINION IN BIOTECHNOLOGY, 2011, 22 (06) :800-808
[9]   Structural analysis of the sialyltransferase CstII from Campylobacter jejuni in complex with a substrate analog [J].
Chiu, CPC ;
Watts, AG ;
Lairson, LL ;
Gilbert, M ;
Lim, D ;
Wakarchuk, WW ;
Withers, SG ;
Strynadka, NCJ .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2004, 11 (02) :163-170
[10]   In vitro selection of sialic acid specific RNA aptamer and its application to the rapid sensing of sialic acid modified sugars [J].
Cho, Suhyung ;
Lee, Bo-Rahm ;
Cho, Byung-Kwan ;
Kim, June-Hyung ;
Kim, Byung-Gee .
BIOTECHNOLOGY AND BIOENGINEERING, 2013, 110 (03) :905-913