16S rRNA Gene Amplicon Sequencing of Gut Microbiota in Three Species of Deep-Sea Fish in Suruga Bay, Japan

被引:10
作者
Iwatsuki, Toshihide [1 ]
Kanazawa, Takahiro [1 ]
Ogasawara, Takato [1 ]
Hosotani, Kento [1 ]
Tsuchiya, Karen [1 ]
Watanabe, Shinichi [1 ]
Suzuki, Tomoko [2 ]
Moriuchi, Ryota [2 ]
Kanesaki, Yu [2 ]
Dohra, Hideo [2 ,3 ]
机构
[1] Numazu Higashi High Sch, Numazu, Japan
[2] Shizuoka Univ, Res Inst Green Sci & Technol, Shizuoka, Japan
[3] Shizuoka Univ, Grad Sch Integrated Sci & Technol, Dept Sci, Shizuoka, Japan
关键词
BACTERIA;
D O I
10.1128/MRA.01260-20
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
We report here 16S rRNA gene amplicon sequence analysis of the gut microbiota in three species of deep-sea fish collected from Suruga Bay, Japan. Of the three species, two were dominated by the phylum Proteobacteria (genus Photobacterium), while one was dominated by the phyla Spirochaetes (genus Brevinema) and Tenericutes (unclassified Mycoplasmataceae).
引用
收藏
页数:3
相关论文
共 12 条
[1]   Dominance of Mycoplasma in the guts of the Long-Jawed Mudsucker, Gillichthys mirabilis, from five California salt marshes [J].
Bano, Nasreen ;
Smith, Angelique deRae ;
Bennett, William ;
Vasquez, Lydia ;
Hollibaugh, James T. .
ENVIRONMENTAL MICROBIOLOGY, 2007, 9 (10) :2636-2641
[2]   Characterization of Deep Sea Fish Gut Bacteria with Antagonistic Potential, from Centroscyllium fabricii (Deep Sea Shark) [J].
Bindiya, E. S. ;
Tina, K. J. ;
Raghul, Subin S. ;
Bhat, Sarita G. .
PROBIOTICS AND ANTIMICROBIAL PROTEINS, 2015, 7 (02) :157-163
[3]   Gut Microbiota and Energy Homeostasis in Fish [J].
Butt, Robyn Lisa ;
Volkoff, Helene .
FRONTIERS IN ENDOCRINOLOGY, 2019, 10
[4]   Genomic and phylogenetic characterization of luminous bacteria symbiotic with the deep-sea fish Chlorophthalmus albatrossis (Aulopiformes: Chlorophthalmidae) [J].
Dunlap, PV ;
Ast, JC .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2005, 71 (02) :930-939
[5]   The Gut Microbiota of Marine Fish [J].
Egerton, Sian ;
Culloty, Sarah ;
Whooley, Jason ;
Stanton, Catherine ;
Ross, R. Paul .
FRONTIERS IN MICROBIOLOGY, 2018, 9
[6]   Gut microbiota of aquatic organisms: A key endpoint for ecotoxicological studies [J].
Evariste, Lauris ;
Barret, Maialen ;
Mottier, Antoine ;
Mouchet, Florence ;
Gauthier, Laury ;
Pinelli, Eric .
ENVIRONMENTAL POLLUTION, 2019, 248 :989-999
[7]   Characterization of the microbiome and bioluminescent symbionts across life stages of Ceratioid Anglerfishes of the Gulf of Mexico [J].
Freed, Lindsay L. ;
Easson, Cole ;
Baker, Lydia J. ;
Fenolio, Dante ;
Sutton, Tracey T. ;
Khan, Yasmin ;
Blackwelder, Patricia ;
Hendry, Tory A. ;
Lopez, Jose, V .
FEMS MICROBIOLOGY ECOLOGY, 2019, 95 (10)
[8]   Environmental and ecological factors that shape the gut bacterial communities of fish: a meta-analysis [J].
Sullam, Karen E. ;
Essinger, Steven D. ;
Lozupone, Catherine A. ;
O'Connor, Michael P. ;
Rosen, Gail L. ;
Knight, Rob ;
Kilham, Susan S. ;
Russell, Jacob A. .
MOLECULAR ECOLOGY, 2012, 21 (13) :3363-3378
[9]   Fish Gut Microbiome: Current Approaches and Future Perspectives [J].
Talwar, Chandni ;
Nagar, Shekhar ;
Lal, Rup ;
Negi, Ram Krishan .
INDIAN JOURNAL OF MICROBIOLOGY, 2018, 58 (04) :397-414
[10]   Fish intestinal microbiome: diversity and symbiosis unravelled by metagenomics [J].
Tarnecki, A. M. ;
Burgos, F. A. ;
Ray, C. L. ;
Arias, C. R. .
JOURNAL OF APPLIED MICROBIOLOGY, 2017, 123 (01) :2-17