Characterization of an NDM-5-producing hypervirulent Klebsiella pneumoniae sequence type 65 clone from a lung transplant recipient

被引:22
作者
Zhao, Jiankang [1 ]
Zhang, Yulin [1 ]
Fan, Yanyan [1 ]
Han, Jiajing [1 ]
Xiong, Zhujia [1 ]
Liu, Xinmeng [1 ]
Li, Binbin [1 ]
Lu, Binghuai [1 ]
Cao, Bin [1 ,2 ]
机构
[1] Natl Clin Res Ctr Resp Dis, Lab Clin Microbiol & Infect Dis, Dept Pulm & Crit Care Med, Ctr Resp Med,China Japan Friendship Hosp, 2 East Yinghua St, Beijing 100029, Peoples R China
[2] Chinese Acad Med Sci, Peking Union Med Coll, Inst Resp Med, Beijing, Peoples R China
关键词
ST65; NDM-5; Klebsiella pneumoniae; IncX3; hypervirulence;
D O I
10.1080/22221751.2021.1889932
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
The emergence of New Delhi Metallo-beta -lactamase (NDM)-producing Klebsiella pneumoniae has aroused critical concern worldwide. Herein, we reported the first emergence of NDM-5-producing K. pneumoniae isolates in a 68-year-old lung transplant recipient, who died of septic shock 13 days after surgery. The K. pneumoniae strain KP22937 isolated from the bloodstream of the patient was analyzed for phenotypes and genotypes. KP22937 belonged to sequence type (ST) 65 and capsule serotype K2, contained iucABCDiutA and iroBCDN virulence clusters, showed high virulence to mice, and was therefore considered a hypervirulent K. pneumoniae. The bla(NDM-5) gene was located on a genomic island region of the IncX3-type plasmid pNDM22937, which was successfully transferred to Escherichia coli EC600 with insignificant fitness costs. The transconjugant demonstrated similar antimicrobial susceptibility and growth kinetics to the recipient E. coli EC600. The plasmid pNDM22937 was almost identical to the bla(NDM-5)-carrying IncX3 plasmids previously reported in K. pneumoniae strains with different ST types and in other species. Our findings raise concerns about the horizontal spread of bla(NDM-5) gene mediated by IncX3 plasmid, where hypervirulent K. pneumoniae strains are also involved. Stricter control measures are needed to prevent the dissemination of the novel clone in hospital settings.
引用
收藏
页码:396 / 399
页数:4
相关论文
共 14 条
[1]   Antibiotic resistance and its cost: is it possible to reverse resistance? [J].
Andersson, Dan I. ;
Hughes, Diarmaid .
NATURE REVIEWS MICROBIOLOGY, 2010, 8 (04) :260-271
[2]   SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing [J].
Bankevich, Anton ;
Nurk, Sergey ;
Antipov, Dmitry ;
Gurevich, Alexey A. ;
Dvorkin, Mikhail ;
Kulikov, Alexander S. ;
Lesin, Valery M. ;
Nikolenko, Sergey I. ;
Son Pham ;
Prjibelski, Andrey D. ;
Pyshkin, Alexey V. ;
Sirotkin, Alexander V. ;
Vyahhi, Nikolay ;
Tesler, Glenn ;
Alekseyev, Max A. ;
Pevzner, Pavel A. .
JOURNAL OF COMPUTATIONAL BIOLOGY, 2012, 19 (05) :455-477
[3]   IslandViewer 4: expanded prediction of genomic islands for larger-scale datasets [J].
Bertelli, Claire ;
Laird, Matthew R. ;
Williams, Kelly P. ;
Lau, Britney Y. ;
Hoad, Gemma ;
Winsor, Geoffrey L. ;
Brinkman, Fiona S. L. .
NUCLEIC ACIDS RESEARCH, 2017, 45 (W1) :W30-W35
[4]   Genomic islands in pathogenic and environmental microorganisms [J].
Dobrindt, U ;
Hochhut, B ;
Hentschel, U ;
Hacker, J .
NATURE REVIEWS MICROBIOLOGY, 2004, 2 (05) :414-424
[5]   A Novel Variant, NDM-5, of the New Delhi Metallo-β-Lactamase in a Multidrug-Resistant Escherichia coli ST648 Isolate Recovered from a Patient in the United Kingdom [J].
Hornsey, Michael ;
Phee, Lynette ;
Wareham, David W. .
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 2011, 55 (12) :5952-5954
[6]   Complete sequencing of an IncX3 plasmid carrying blaNDM-5 allele reveals an early stage in the dissemination of the blaNDM gene [J].
Krishnaraju, M. ;
Kamatchi, C. ;
Jha, A. K. ;
Devasena, N. ;
Vennila, R. ;
Sumathi, G. ;
Vaidyanathan, R. .
INDIAN JOURNAL OF MEDICAL MICROBIOLOGY, 2015, 33 (01) :30-38
[7]   Comparative analysis of Klebsiella pneumoniae strains isolated in 2012-2016 that differ by antibiotic resistance genes and virulence genes profiles [J].
Lev, Anastasia, I ;
Astashkin, Eugeny, I ;
Kislichkina, Angelina A. ;
Solovieva, Ekaterina, V ;
Kombarova, Tatiana, I ;
Korobova, Olga, V ;
Ershova, Olga N. ;
Alexandrova, Irina A. ;
Malikov, Vladimir E. ;
Bogun, Alexander G. ;
Borzilov, Alexander, I ;
Volozhantsev, Nikolay V. ;
Svetoch, Edward A. ;
Fursova, Nadezhda K. .
PATHOGENS AND GLOBAL HEALTH, 2018, 112 (03) :142-151
[8]   Fitness Cost of blaNDM-5-Carrying p3R-IncX3 Plasmids in Wild-Type NDM-Free Enterobacteriaceae [J].
Ma, Tengfei ;
Fu, Jiani ;
Xie, Ning ;
Ma, Shizhen ;
Lei, Lei ;
Zhai, Weishuai ;
Shen, Yingbo ;
Sun, Chengtao ;
Wang, Shaolin ;
Shen, Zhangqi ;
Wang, Yang ;
Walsh, Timothy R. ;
Shen, Jianzhong .
MICROORGANISMS, 2020, 8 (03)
[9]   NDM-5 and OXA-181 Beta-Lactamases, a Significant Threat Continues To Spread in the Americas [J].
Rojas, Laura J. ;
Hujer, Andrea M. ;
Rudin, Susan D. ;
Wright, Meredith S. ;
Domitrovic, T. Nicholas ;
Marshall, Steven H. ;
Hujer, Kristine M. ;
Richter, Sandra S. ;
Cober, Eric ;
Perez, Federico ;
Adams, Mark D. ;
van Duin, David ;
Bonomo, Robert A. .
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 2017, 61 (07)
[10]   Prokka: rapid prokaryotic genome annotation [J].
Seemann, Torsten .
BIOINFORMATICS, 2014, 30 (14) :2068-2069