Crystallogenesis of Membrane Proteins Mediated by Polymer-Bounded Lipid Nanodiscs

被引:117
作者
Broecker, Jana [1 ]
Eger, Bryan T. [1 ]
Ernst, Oliver P. [1 ,2 ]
机构
[1] Univ Toronto, Dept Biochem, Struct Neurobiol, 1 Kings Coll Circle, Toronto, ON M5S 1A8, Canada
[2] Univ Toronto, Dept Mol Genet, 1 Kings Coll Circle, Toronto, ON M5S 1A8, Canada
关键词
DETERGENT-FREE ISOLATION; X-RAY CRYSTALLOGRAPHY; MALEIC ACID COPOLYMER; CRYSTALLIZING MEMBRANE; MESO; SOLUBILIZATION; SYSTEM; RECONSTITUTION; STABILIZATION; PHOSPHOLIPIDS;
D O I
10.1016/j.str.2016.12.004
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
For some membrane proteins, detergent-mediated solubilization compromises protein stability and functionality, often impairing biophysical and structural analyses. Hence, membrane-protein structure determination is a continuing bottleneck in the field of protein crystallography. Here, as an alternative to approaches mediated by conventional detergents, we report the crystallogenesis of a recombinantly produced membrane protein that never left a lipid bilayer environment. We used styrene-maleic acid (SMA) copolymers to solubilize lipid-embedded proteins into SMA nanodiscs, purified these discs by affinity and size-exclusion chromatography, and transferred proteins into the lipidic cubic phase (LCP) for in meso crystallization. The 2.0-angstrom structure of an a-helical seven-transmembrane microbial rhodopsin thus obtained is of high quality and virtually identical to the 2.2-angstrom structure obtained from traditional detergent-based purification and subsequent LCP crystallization.
引用
收藏
页码:384 / 392
页数:9
相关论文
共 66 条
  • [11] Crystallizing membrane proteins using lipidic mesophases
    Caffrey, Martin
    Cherezov, Vadim
    [J]. NATURE PROTOCOLS, 2009, 4 (05) : 706 - 731
  • [12] Chae PS, 2010, NAT METHODS, V7, P1003, DOI [10.1038/nmeth.1526, 10.1038/NMETH.1526]
  • [13] Membrane protein crystallization in meso: Lipid type-tailoring of the cubic phase
    Cherezov, V
    Clogston, J
    Misquitta, Y
    Abdel-Gawad, W
    Caffrey, M
    [J]. BIOPHYSICAL JOURNAL, 2002, 83 (06) : 3393 - 3407
  • [14] The styrene-maleic acid copolymer: a versatile tool in membrane research
    Dorr, Jonas M.
    Scheidelaar, Stefan
    Koorengevel, Martijn C.
    Dominguez, Juan J.
    Schafer, Marre
    van Walree, Cornelis A.
    Killian, J. Antoinette
    [J]. EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS, 2016, 45 (01): : 3 - 21
  • [15] Detergent-free isolation, characterization, and functional reconstitution of a tetrameric K+ channel: The power of native nanodiscs
    Dorr, Jonas M.
    Koorengevel, Martijn C.
    Schafer, Marre
    Prokofyev, Alexander V.
    Scheidelaar, Stefan
    van der Cruijsen, Elwin A. W.
    Dafforn, Timothy R.
    Baldus, Marc
    Killian, J. Antoinette
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2014, 111 (52) : 18607 - 18612
  • [16] The Magic of Bicelles Lights Up Membrane Protein Structure
    Duerr, Ulrich H. N.
    Gildenberg, Melissa
    Ramamoorthy, Ayyalusamy
    [J]. CHEMICAL REVIEWS, 2012, 112 (11) : 6054 - 6074
  • [17] Features and development of Coot
    Emsley, P.
    Lohkamp, B.
    Scott, W. G.
    Cowtan, K.
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 2010, 66 : 486 - 501
  • [18] Microbial and Animal Rhodopsins: Structures, Functions, and Molecular Mechanisms
    Ernst, Oliver P.
    Lodowski, David T.
    Elstner, Marcus
    Hegemann, Peter
    Brown, Leonid S.
    Kandori, Hideki
    [J]. CHEMICAL REVIEWS, 2014, 114 (01) : 126 - 163
  • [19] How good are my data and what is the resolution?
    Evans, Philip R.
    Murshudov, Garib N.
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 2013, 69 : 1204 - 1214
  • [20] Protein folding in membranes
    Fiedler, Sebastian
    Broecker, Jana
    Keller, Sandro
    [J]. CELLULAR AND MOLECULAR LIFE SCIENCES, 2010, 67 (11) : 1779 - 1798