MicroRNA genetic variations: association with type 2 diabetes

被引:61
作者
Ciccacci, Cinzia [1 ]
Di Fusco, Davide [1 ]
Cacciotti, Laura [2 ]
Morganti, Roberto [2 ]
D'Amato, Cinzia [2 ]
Greco, Carla [2 ]
Rufini, Sara [1 ]
Novelli, Giuseppe [3 ,4 ]
Sangiuolo, Federica [1 ]
Spallone, Vincenza [2 ]
Borgiani, Paola [1 ]
机构
[1] Univ Roma Tor Vergata, Genet Sect, Dept Biomed & Prevent, I-00133 Rome, Italy
[2] Univ Roma Tor Vergata, Dept Syst Med, I-00133 Rome, Italy
[3] San Pietro FBF Hosp, Unit Med Genet, Rome, Italy
[4] ANVUR, Natl Agcy Evaluat Univ & Res, Rome, Italy
关键词
MicroRNA; Type; 2; diabetes; Single-nucleotide polymorphisms (SNPs); Susceptibility alleles; EXPRESSION; CELLS; TARGETS; DIFFERENTIATION; OBESITY; MIR-27A;
D O I
10.1007/s00592-013-0469-7
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
MicroRNAs are small single-stranded molecules that have emerged as important genomic regulators in different pathways. Different studies have shown that they are implicated in the metabolism and glucose homeostasis, and therefore, they could also be involved in the pathogenesis of metabolic disorders such as type 2 diabetes (T2DM). The aim of this study was to verify whether genetic variations in candidate microRNA (miRNA or miR) genes could contribute to T2DM susceptibility. We have selected 13 miRNAs as candidate loci according to literature data and to a computational analysis. MicroRNA genes were analyzed by direct sequencing in a cohort of 163 Italian T2DM patients and 185 healthy controls. We identified 6 novel variants never described before and 9 SNPs already described in databases. Five newly identified variants were found only in the cases group. We performed a case/control association study to test the associations of particular alleles/genotypes of identified SNPs with the disease. Two polymorphisms were associated with T2DM susceptibility: in particular, the G allele of rs895819 in hsa-mir-27a has shown a significantly protective effect (OR = 0.58 and P = 0.008), while the G allele of rs531564 in hsa-mir-124a appears to be a risk allele (OR = 2.15, P = 0.008). This is the first report indicating that genetic polymorphisms in miRNA regions could contribute to T2DM susceptibility.
引用
收藏
页码:867 / 872
页数:6
相关论文
共 25 条
[1]   Impaired miR-146a expression links subclinical inflammation and insulin resistance in Type 2 diabetes [J].
Balasubramanyam, M. ;
Aravind, S. ;
Gokulakrishnan, K. ;
Prabu, P. ;
Sathishkumar, C. ;
Ranjani, H. ;
Mohan, V. .
MOLECULAR AND CELLULAR BIOCHEMISTRY, 2011, 351 (1-2) :197-205
[2]   MicroRNA-124a regulates Foxa2 expression and intracellular signaling in pancreatic β-cell lines [J].
Baroukh, Nadine ;
Ravier, Magalie A. ;
Loder, Merewyn K. ;
Hill, Elaine V. ;
Bounacer, Ali ;
Scharfmann, Raphael ;
Rutter, Guy A. ;
Van Obberghen, Emmanuel .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2007, 282 (27) :19575-19588
[3]   Function of microRNA-375 and microRNA-124a in pancreas and brain [J].
Baroukh, Nadine N. ;
Van Obberghen, Emmanuel .
FEBS JOURNAL, 2009, 276 (22) :6509-6521
[4]   The microRNA.org resource: targets and expression [J].
Betel, Doron ;
Wilson, Manda ;
Gabow, Aaron ;
Marks, Debora S. ;
Sander, Chris .
NUCLEIC ACIDS RESEARCH, 2008, 36 :D149-D153
[5]   TCF7L2 gene polymorphisms and type 2 diabetes: association with diabetic retinopathy and cardiovascular autonomic neuropathy [J].
Ciccacci, Cinzia ;
Di Fusco, Davide ;
Cacciotti, Laura ;
Morganti, Roberto ;
D'Amato, Cinzia ;
Novelli, Giuseppe ;
Sangiuolo, Federica ;
Spallone, Vincenza ;
Borgiani, Paola .
ACTA DIABETOLOGICA, 2013, 50 (05) :789-799
[6]   MicroRNAs in β-Cell Biology, Insulin Resistance, Diabetes and Its Complications [J].
Fernandez-Valverde, Selene L. ;
Taft, Ryan J. ;
Mattick, John S. .
DIABETES, 2011, 60 (07) :1825-1831
[7]   MicroRNAs: 'ribo-regulators' of glucose homeostasis [J].
Gauthier, BR ;
Wollheim, CB .
NATURE MEDICINE, 2006, 12 (01) :36-38
[8]   miRBase: tools for microRNA genomics [J].
Griffiths-Jones, Sam ;
Saini, Harpreet Kaur ;
van Dongen, Stijn ;
Enright, Anton J. .
NUCLEIC ACIDS RESEARCH, 2008, 36 :D154-D158
[9]   Role of microRNAs in obesity and the metabolic syndrome [J].
Heneghan, H. M. ;
Miller, N. ;
Kerin, M. J. .
OBESITY REVIEWS, 2010, 11 (05) :354-361
[10]   MicroRNA-125a is over-expressed in insulin target tissues in a spontaneous rat model of Type 2 Diabetes [J].
Herrera, Blanca M. ;
Lockstone, Helen E. ;
Taylor, Jennifer M. ;
Wills, Quin F. ;
Kaisaki, Pamela J. ;
Barrett, Amy ;
Camps, Carme ;
Fernandez, Christina ;
Ragoussis, Jiannis ;
Gauguier, Dominique ;
McCarthy, Mark I. ;
Lindgren, Cecilia M. .
BMC MEDICAL GENOMICS, 2009, 2