AI-ML applications in bioprocessing: ML as an enabler of real time quality prediction in continuous manufacturing of mAbs

被引:28
作者
Nikita, Saxena [1 ]
Thakur, Garima [1 ]
Jesubalan, Naveen G. [1 ]
Kulkarni, Amey [2 ]
Yezhuvath, Vinesh B. [2 ]
Rathore, Anurag S. [1 ]
机构
[1] Indian Inst Technol, Dept Chem Engn, Delhi, India
[2] Tata Consultancy Serv Ltd, TCS Res, Pune, Maharashtra, India
关键词
DNN; SVR; Random forest; Decision tree; Machine learning; Monoclonal antibody (MAB); CATION-EXCHANGE CHROMATOGRAPHY; MONOCLONAL-ANTIBODY MONOMER; ARTIFICIAL-INTELLIGENCE; CHARGE VARIANTS; DESIGN; SEPARATION; REGRESSION; SELECTION; CAPTURE; MODELS;
D O I
10.1016/j.compchemeng.2022.107896
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
As continuous manufacturing of biotherapeutics gains steam, there is an increasing interest in using machine learning (ML) techniques for real time prediction of product quality and for process control. This paper focuses on application of different ML techniques for predicting critical process attributes that are pertinent to capture and polishing chromatography. Data from pH, UV, and conductivity sensors are acquired and pre-processed. For the present case study, tree-based regression techniques (decision tree and random forest) outperformed in all cases. The final model, random forest regression model, resulted in prediction errors of <5% for all predicted attributes. The results showed that random forest models exhibit optimal performance for smaller process-scale datasets with low chances of overfitting, are computationally inexpensive and do not require a graphics processing unit. The proposed approach is well suited for implementation in a continuous mAb train for real time prediction of chromatography process attributes. (c) 2022 Elsevier Ltd. All rights reserved.
引用
收藏
页数:13
相关论文
共 54 条
  • [1] Alpaydin E., 2020, Introduction to Machine Learning, VFourth
  • [2] [Anonymous], 2020, Towards Data Science
  • [3] [Anonymous], 2019, Quality Considerations for Continuous Manufacturing
  • [4] Guidance for Industry
  • [5] Prediction of aqueous intrinsic solubility of druglike molecules using Random Forest regression trained with Wiki-pS0 database
    Avdeef, Alex
    [J]. ADMET AND DMPK, 2020, 8 (01): : 29 - 77
  • [6] Model-assisted process characterization and validation for a continuous two-column protein A capture process
    Baur, Daniel
    Angelo, James
    Chollangi, Srinivas
    Mueller-Spaeth, Thomas
    Xu, Xuankuo
    Ghose, Sanchayita
    Li, Zheng Jian
    Morbidelli, Massimo
    [J]. BIOTECHNOLOGY AND BIOENGINEERING, 2019, 116 (01) : 87 - 98
  • [7] Modeling and robust pooling design of a preparative cation-exchange chromatography step for purification of monoclonal antibody monomer from aggregates
    Borg, Niklas
    Brodsky, Yan
    Moscariello, John
    Vunnum, Suresh
    Vedantham, Ganesh
    Westerberg, Karin
    Nilsson, Bernt
    [J]. JOURNAL OF CHROMATOGRAPHY A, 2014, 1359 : 170 - 181
  • [8] Bramer M., 2007, PRINCIPLES DATA MINI, P121, DOI [10.1007/978-1-4471-4884-5_9, DOI 10.1007/978-1-4471-4884-5_9]
  • [9] The Akaike information criterion: Background, derivation, properties, application, interpretation, and refinements
    Cavanaugh, Joseph E.
    Neath, Andrew A.
    [J]. WILEY INTERDISCIPLINARY REVIEWS-COMPUTATIONAL STATISTICS, 2019, 11 (03)
  • [10] CDC Center for Drug Evaluation and Research (U.S.) Center for Biologics Evaluation and Research (U.S.) & International Conference on Harmonisation, 2009, GUID IND Q8 R2 PHARM