Pushing the limits of sulfur SAD phasing: de novo structure solution of the N-terminal domain of the ectodomain of HCV E1

被引:30
作者
El Omari, Kamel [1 ]
Iourin, Oleg [1 ]
Kadlec, Jan [1 ]
Fearn, Richard [2 ]
Hall, David R. [2 ]
Harlos, Karl [1 ]
Grimes, Jonathan M. [1 ,2 ]
Stuart, David I. [1 ,2 ]
机构
[1] Univ Oxford, Wellcome Trust Ctr Human Genet, Div Struct Biol, Oxford OX3 7BN, England
[2] Diamond Light Source Ltd, Didcot OX11 0DE, Oxon, England
来源
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY | 2014年 / 70卷
基金
英国惠康基金; 英国医学研究理事会;
关键词
MULTIWAVELENGTH ANOMALOUS DIFFRACTION; NANOLITRE CRYSTALLIZATION EXPERIMENTS; NATIVE BIOLOGICAL MACROMOLECULES; PROTEIN; RADIATION; MODEL;
D O I
10.1107/S139900471401339X
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Single-wavelength anomalous dispersion of S atoms (S-SAD) is an elegant phasing method to determine crystal structures that does not require heavy-atom incorporation or selenomethionine derivatization. Nevertheless, this technique has been limited by the paucity of the signal at the usual X-ray wavelengths, requiring very accurate measurement of the anomalous differences. Here, the data collection and structure solution of the N-terminal domain of the ectodomain of HCV E1 from crystals that diffracted very weakly is reported. By combining the data from 32 crystals, it was possible to solve the sulfur substructure and calculate initial maps at 7 angstrom resolution, and after density modication and phase extension using a higher resolution native data set to 3.5 angstrom resolution model building was achievable.
引用
收藏
页码:2197 / 2203
页数:7
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