Screening for inter-individual splicing differences in human GSTM4 and the discovery of a single nucleotide substitution related to the tandem skipping of two exons

被引:9
作者
Denson, Jackie
Xi, Zongying
Wu, Yongchun
Yang, Wenjian
Neale, Geoffrey
Zhang, Jiong
机构
[1] St Jude Childrens Res Hosp, Hartwell Ctr Bioinformat & Biotechnol, Memphis, TN 38103 USA
[2] St Jude Childrens Res Hosp, Dept Pharmaceut Sci, Memphis, TN 38103 USA
关键词
glutathione S-transferase; polymorphism; splicing; tandem; skipping;
D O I
10.1016/j.gene.2006.05.012
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The glutathione S-transferase Mu class (GSTM) genes encode phase II metabolism enzymes that are involved in the detoxification of various carcinogens and drugs. Some genetic polymorphisms in GSTM genes are related to disease phenotypes and drug-metabolism differences in the population. Polymorphisms that alter gene-splicing patterns are functionally very important because they often lead to the insertion or deletion of many amino acids. To identify inter-individual differences in the splicing pattern of the GSTM4 gene, we used reverse transcriptase polymerase chain reaction (RT-PCR) to screen cDNA from 96 human liver samples. We discovered a novel splice variant of GSTM4 that resulted from tandem skipping of exons 4 and 5. This exon-skipping event is associated with a mutation at the splice acceptor site in intron 4. (c) 2006 Elsevier B.V. All rights reserved.
引用
收藏
页码:148 / 155
页数:8
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