Identification of salt-stress induced differentially expressed genes in barley leaves using the annealing-control-primer-based GeneFishing technique

被引:0
作者
Lee, Sang-Hoon [1 ]
Lee, Ki-Won [1 ]
Kim, Ki-Yong [1 ]
Choi, Gi Jun [1 ]
Yoon, Sei Hyung [1 ]
Ji, Hee Chung [1 ]
Seo, Sung [1 ]
Lim, Young Chul [1 ]
Ahsan, Nagib [2 ]
机构
[1] Rural Dev Adm, Natl Inst Anim Sci, Grassland & Forages Res Ctr, Cheonan 330801, South Korea
[2] Natl Inst Crop Sci, Tsukuba, Ibaraki 3058518, Japan
关键词
Barley; GeneFishing technique; salt stress; HEAT-SHOCK PROTEINS; 1-PHOSPHATE SYNTHASE; SALINITY; METALLOTHIONEIN; BIOSYNTHESIS; LIPOXYGENASE; ACCUMULATION; DROUGHT; ARABIDOPSIS; METABOLISM;
D O I
暂无
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
In the present study, we have used an annealing-control-primer (ACP)-based differentially display RTPCR method to identify salt-stress-induced differentially expressed genes (DEGs) in barley leaves. Using 120 ACPs, a total of 11 up-regulated genes were identified and sequenced. Temporal expression patterns of some up-regulated DEGs in response to salt stress were further analyzed by Northern blot analysis. The possible roles of these identified genes are discussed within the context of their putative role in response to salt stress. Thus, the identification of some novel genes - such as SnRK1-type protein kinase; 17 kDa, class I, small heat shock protein; and RNase S-like protein precursor genes may offer a new avenue for better understanding the salt stress response in plants, knowledge which might be helpful for developing future strategies.
引用
收藏
页码:1326 / 1331
页数:6
相关论文
共 40 条
[21]   Elevated zeaxanthin bound to oligomeric LHCII enhances the resistance of Arabidopsis to photooxidative stress by a lipid-protective, antioxidant mechanism [J].
Johnson, Matthew P. ;
Havaux, Michel ;
Triantaphylides, Christian ;
Ksas, Brigitte ;
Pascal, Andrew A. ;
Robert, Bruno ;
Davison, Paul A. ;
Ruban, Alexander V. ;
Horton, Peter .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2007, 282 (31) :22605-22618
[22]   Identification of replicative senescence-associated genes in human umbilical vein endothelial cells by an annealing control primer system [J].
Kim, Tae Woo ;
Kim, Hyun Jung ;
Lee, ChuHee ;
Kim, Hwa Young ;
Baek, Suk-Hwan ;
Kim, Jung Hye ;
Kwon, Ki-Sun ;
Kim, Jae-Ryong .
EXPERIMENTAL GERONTOLOGY, 2008, 43 (04) :286-295
[23]   Annealing control primer system for identification of differentially expressed genes on agarose gels [J].
Kim, YJ ;
Kwak, CI ;
Gu, YY ;
Hwang, IT ;
Chun, JY .
BIOTECHNIQUES, 2004, 36 (03) :424-+
[24]   Transcript profiling of salinity stress responses by large-scale expressed sequence tag analysis in Mesembryanthemum crystallinum [J].
Kore-eda, S ;
Cushman, MA ;
Akselrod, I ;
Bufford, D ;
Fredrickson, M ;
Clark, E ;
Cushman, JC .
GENE, 2004, 341 :83-92
[25]   A proteomic approach in analyzing heat-responsive proteins in rice leaves [J].
Lee, Dong-Gi ;
Ahsan, Nagib ;
Lee, Sang-Hoon ;
Kang, Kyu Young ;
Bahk, Jeong Dong ;
Lee, In-Jung ;
Lee, Byung-Hyun .
PROTEOMICS, 2007, 7 (18) :3369-3383
[26]   AhSL28, a senescence- and phosphate starvation-induced S-like RNase gene in Antirrhinum [J].
Liang, LZ ;
Lai, Z ;
Ma, WS ;
Zhang, YS ;
Xue, YB .
BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION, 2002, 1579 (01) :64-71
[27]   Antisense repression of StubGAL83 affects root and tuber development in potato [J].
Lovas, A ;
Bimbó, A ;
Szabó, L ;
Bánfalvi, Z .
PLANT JOURNAL, 2003, 33 (01) :139-147
[28]   LIPOXYGENASE ACTIVITY ASSOCIATED TO ISOLATED SOYBEAN PLASMA-MEMBRANES [J].
MACRI, F ;
BRAIDOT, E ;
PETRUSSA, E ;
VIANELLO, A .
BIOCHIMICA ET BIOPHYSICA ACTA-LIPIDS AND LIPID METABOLISM, 1994, 1215 (1-2) :109-114
[29]   ALCOHOL-DEHYDROGENASE GENE-EXPRESSION IN POTATO FOLLOWING ELICITOR AND STRESS TREATMENT [J].
MATTON, DP ;
CONSTABEL, P ;
BRISSON, N .
PLANT MOLECULAR BIOLOGY, 1990, 14 (05) :775-783
[30]  
Nelson DE, 1998, PLANT CELL, V10, P753