Identification of Novel Biomarkers With Diagnostic Value and Immune Infiltration in Burn Injury

被引:1
|
作者
Zhou, Sitong [1 ]
Wang, Kangchun [2 ]
Wang, Jingru [3 ]
He, Jia [3 ]
Zheng, Wenlian [4 ]
Long, Chengmin [4 ]
Chen, Xiaodong [3 ]
Yang, Ronghua [5 ]
机构
[1] First Peoples Hosp Foshan, Dept Dermatol, Foshan, Peoples R China
[2] China Med Univ, Affiliated Hosp 1, Dept Organ Transplantat & Hepatobiliary, Shenyang, Peoples R China
[3] First Peoples Hosp Foshan, Dept Burn Surg & Skin Regenerat, Foshan, Peoples R China
[4] Guangdong Med Univ, Grad Sch, Zhanjiang, Peoples R China
[5] South China Univ Technol, Sch Med, Guangzhou Peoples Hosp 1, Dept Burn & Plast Surg, Guangzhou, Peoples R China
基金
中国国家自然科学基金;
关键词
burn injury; inflammation; immune infiltration; functional enrichment analysis; CIBERSORT; GENES; TRAUMA;
D O I
10.3389/fgene.2022.829841
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Burn injury is an intractable problem in the field of surgery where screening relevant target genes and exploring pathological mechanisms through bioinformatic methods has become a necessity. Herein, we integrated three burn injury mRNA microarray datasets from the Gene Expression Omnibus database to analyze the hub differentially expressed genes (DEGs) between burn injury patient samples and healthy human samples; we conducted multiple functional enrichment analyses and constructed the protein-protein interaction (PPI) network. Finally, we evaluated the immune infiltration in the burn injury microenvironment. A total of 84 intersection DEGs (32 upregulated and 52 downregulated) were screened in burn injury patients via integrated analyses. Upregulated genes were primarily enriched in regulation of T cell activation, regulation of response to DNA damage stimulus, positive regulation of innate immune response, positive regulation of defense response. We also identified 10 hub genes from the PPI network (CCNB2, MYO10, TTK, POLQ, VASP, TIMP1, CDK16, MMP1, ZYX, and PKMYT1). Next, we found that 22 immune cells were substantially changed during the burn injury by CIBERSORT. In addition, we verified that VASP and POLQ are two novel diagnostic markers in burn processes with high diagnostic efficacy via immunohistochemistry. In summary, we identified several key genes involved in burn injury and provided a favorable basis for elucidating the molecular mechanisms of burn injury through comprehensive bioinformatic analysis.
引用
收藏
页数:13
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