Reassessment of the Reaction Mechanism in the Heme Dioxygenases

被引:61
作者
Chauhan, Nishma [2 ]
Thackray, Sarah J. [1 ]
Rafice, Sara A. [2 ]
Eaton, Graham [2 ]
Lee, Michael [2 ]
Efimov, Igor [2 ]
Basran, Jaswir [3 ]
Jenkins, Paul R. [2 ]
Mowat, Christopher G. [1 ]
Chapman, Stephen K. [1 ]
Raven, Emma Lloyd [2 ]
机构
[1] Univ Edinburgh, Sch Chem, EaStCHEM, Edinburgh EH9 3JJ, Midlothian, Scotland
[2] Univ Leicester, Dept Chem, Leicester LE1 7RH, Leics, England
[3] Univ Leicester, Dept Biochem, Leicester LE1 9HN, Leics, England
基金
英国惠康基金;
关键词
HUMAN INDOLEAMINE 2,3-DIOXYGENASE; TRYPTOPHAN; CATALYSIS;
D O I
10.1021/ja808326g
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Indoleamine 2,3-dioxygenase (IDO) and tryptophan 2,3-dioxygenase (TDO) are heme enzymes that catalyze the O-2-dependent oxidation of L-tryptophan to N-formyl-kynurenine. Previous proposals for the mechanism of this reaction have suggested that deprotonation of the indole NH group, either by an active-site base or by oxygen bound to the heme iron, as the initial step. In this work, we have examined the activity of 1-Me-L-Trp with three different heme dioxygenases and their site-directed variants. We find, in contrast to previous work, that 1-Me-L-Trp is a substrate for the heme dioxygenase enzymes. These observations suggest that deprotonation of the indole N-1 is not essential for catalysis, and an alternative reaction mechanism, based on the known chemistry of indoles, is presented.
引用
收藏
页码:4186 / +
页数:3
相关论文
共 14 条
[1]   A kinetic, spectroscopic, and redox study of human tryptophan 2,3-dioxygenase [J].
Basran, Jaswir ;
Rafice, Sara A. ;
Chauhan, Nishma ;
Efimov, Igor ;
Cheesman, Myles R. ;
Ghamsari, Lila ;
Raven, Emma Lloyd .
BIOCHEMISTRY, 2008, 47 (16) :4752-4760
[2]   1-METHYL-DL-TRYPTOPHAN, BETA-(3-BENZOFURANYL)-DL-ALANINE (THE OXYGEN ANALOG OF TRYPTOPHAN), AND BETA-[3-BENZO(B)THIENYL]-DL-ALANINE (THE SULFUR ANALOG OF TRYPTOPHAN) ARE COMPETITIVE INHIBITORS FOR INDOLEAMINE 2,3-DIOXYGENASE [J].
CADY, SG ;
SONO, M .
ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS, 1991, 291 (02) :326-333
[3]   The role of serine 167 in human indoleamine 2,3-dioxygenase: A comparison with tryptophan 2,3-dioxygenase [J].
Chauhan, Nishma ;
Basran, Jaswir ;
Efimov, Igor ;
Svistunenko, Dimitri A. ;
Seward, Harriet E. ;
Moody, Peter C. E. ;
Raven, Emma Lloyd .
BIOCHEMISTRY, 2008, 47 (16) :4761-4769
[4]   Density functional theory study on a missing piece in understanding of heme chemistry: The reaction mechanism for indoleamine 2,3-dioxygenase and tryptophan 2,3-dioxygenase [J].
Chung, Lung Wa ;
Li, Xin ;
Sugimoto, Hiroshi ;
Shiro, Yoshitsugu ;
Morokuma, Keiji .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2008, 130 (37) :12299-12309
[5]   Molecular insights into substrate recognition and catalysis by tryptophan 2,3-dioxygenase [J].
Forouhar, Farhad ;
Anderson, J. L. Ross ;
Mowat, Christopher G. ;
Vorobiev, Sergey M. ;
Hussain, Arif ;
Abashidze, Mariam ;
Bruckmann, Chiara ;
Thackray, Sarah J. ;
Seetharaman, Jayaraman ;
Tucker, Todd ;
Xiao, Rong ;
Ma, Li-Chung ;
Zhao, Li ;
Acton, Thomas B. ;
Montelione, Gaetano T. ;
Chapman, Stephen K. ;
Tong, Liang .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2007, 104 (02) :473-478
[6]  
JOULE JA, HETEROCYCLIC CHEM 20, P319
[7]  
KNOX WE, 1950, J BIOL CHEM, V187, P419
[8]  
LEEDS JM, 1993, J BIOL CHEM, V268, P17781
[9]   Heme-containing oxygenases [J].
Sono, M ;
Roach, MP ;
Coulter, ED ;
Dawson, JH .
CHEMICAL REVIEWS, 1996, 96 (07) :2841-2887
[10]   Crystal structure of human indoleamine 2,3-dioxygenase:: Catalytic mechanism of O2 incorporation by a heme-containing dioxygenase [J].
Sugimoto, H ;
Oda, SI ;
Otsuki, T ;
Hino, T ;
Yoshida, T ;
Shiro, Y .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2006, 103 (08) :2611-2616