Infernal 1.0: inference of RNA alignments

被引:1074
作者
Nawrocki, Eric P. [1 ]
Kolbe, Diana L. [1 ]
Eddy, Sean R. [1 ]
机构
[1] HHMI, Ashburn, VA 20147 USA
关键词
NONCODING RNA; SECONDARY STRUCTURE; SEQUENCE; SEARCH; FAMILIES; DATABASE; GENOMES;
D O I
10.1093/bioinformatics/btp157
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
INFERNAL builds consensus RNA secondary structure profiles called covariance models (CMs), and uses them to search nucleic acid sequence databases for homologous RNAs, or to create new sequence- and structure-based multiple sequence alignments.
引用
收藏
页码:1335 / 1337
页数:3
相关论文
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