Complete Mitochondrial Genome of Eruca sativa Mill. (Garden Rocket)

被引:5
|
作者
Wang, Yankun [1 ]
Chu, Pu [1 ]
Yang, Qing [1 ]
Chang, Shengxin [1 ]
Chen, Jianmei [1 ]
Hu, Maolong [2 ]
Guan, Rongzhan [1 ,3 ]
机构
[1] Nanjing Agr Univ, State Key Lab Crop Genet & Germplasm Enhancement, Nanjing, Jiangsu, Peoples R China
[2] Jiangsu Acad Agr Sci, Inst Econ Crop, Nanjing, Jiangsu, Peoples R China
[3] Nanjing Agr Univ, Jiangsu Collaborat Innovat Ctr Modern Crop Prod, Nanjing, Jiangsu, Peoples R China
来源
PLOS ONE | 2014年 / 9卷 / 08期
基金
中国国家自然科学基金;
关键词
COMPLETE NUCLEOTIDE-SEQUENCE; CYTOPLASMIC MALE-STERILITY; RAPHANUS-SATIVUS; BRASSICA-NAPUS; GENE; DNA; DIVERGENCE; EVOLUTION; CONTAINS; L;
D O I
10.1371/journal.pone.0105748
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Eruca sativa (Cruciferae family) is an ancient crop of great economic and agronomic importance. Here, the complete mitochondrial genome of Eruca sativa was sequenced and annotated. The circular molecule is 247 696 bp long, with a G+C content of 45.07%, containing 33 protein-coding genes, three rRNA genes, and 18 tRNA genes. The Eruca sativa mitochondrial genome may be divided into six master circles and four subgenomic molecules via three pairwise large repeats, resulting in a more dynamic structure of the Eruca sativa mtDNA compared with other cruciferous mitotypes. Comparison with the Brassica napus MtDNA revealed that most of the genes with known function are conserved between these two mitotypes except for the ccmFN2 and rrn18 genes, and 27 point mutations were scattered in the 14 protein-coding genes. Evolutionary relationships analysis suggested that Eruca sativa is more closely related to the Brassica species and to Raphanus sativus than to Arabidopsis thaliana.
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页数:8
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