Artificial intelligence for accelerating time integrations inmultiscale modeling

被引:19
作者
Han, Changnian [1 ]
Zhang, Peng [2 ]
Bluestein, Danny [2 ]
Cong, Guojing [3 ]
Deng, Yuefan [1 ]
机构
[1] SUNY Stony Brook, Dept Appl Math & Stat, Stony Brook, NY 11794 USA
[2] SUNY Stony Brook, Dept Biomed Engn, Stony Brook, NY 11794 USA
[3] IBM Thomas J Watson Res Ctr, Yorktown Hts, NY 10598 USA
基金
美国国家卫生研究院;
关键词
Adaptive time stepping; Artificial intelligence; Multiscale modeling; Platelet dynamics; DISSIPATIVE PARTICLE DYNAMICS; MOLECULAR-DYNAMICS; MULTIPLE; PLATELETS; ALGORITHM; SYSTEMS; SCALES; SIMULATIONS;
D O I
10.1016/j.jcp.2020.110053
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
We developed a novel data-driven Artificial Intelligence-enhanced Adaptive Time Stepping algorithm (AI-ATS) that can adapt timestep sizes to underlying biophysical dynamics. We demonstrated its values in solving a complex biophysical problem, at multiple spatiotemporal scales, that describes platelet dynamics in shear blood flow. In order to achieve a significant speedup of this computationally demanding problem, we integrated a framework of novel AI algorithms into the solution of the platelet dynamics equations. Our framework involves recurrent neural network-based autoencoders by the Long Short-Term Memory and the Gated Recurrent Units as the first step for memorizing the dynamic states in long-term dependencies for the input time series, followed by two fully-connected neural networks to optimize timestep sizes and step jumps. The computational efficiency of our AI-ATS is underscored by assessing the accuracy and speed of a multiscale simulation of the platelet with the standard time stepping algorithm (STS). By adapting the timestep size, our AI-ATS guides the omission of multiple redundant time steps without sacrificing significant accuracy of the dynamics. Compared to the STS, our AI-ATS achieved a reduction of 40% unnecessary calculations while bounding the errors of mechanical and thermodynamic properties to 3%. (C) 2020 Elsevier Inc. All rights reserved.
引用
收藏
页数:17
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