Development and Validation of an RNA-Binding Protein-Based Prognostic Model for Ovarian Serous Cystadenocarcinoma

被引:0
作者
He, Yunan [1 ]
Zeng, Sen [2 ]
Hu, Shunjie [3 ]
Zhang, Fengqian [1 ]
Shan, Nianchun [4 ]
机构
[1] Sun Yat Sen Univ, Sun Yat Sen Mem Hosp, Dept Gynecol & Obstet, Guangzhou, Peoples R China
[2] Cent South Univ, Dept Neurol, Xiangya Hosp 3, Changsha, Peoples R China
[3] Sun Yat Sen Univ, Zhongshan Sch Med, Guangzhou, Peoples R China
[4] Cent South Univ, Xiangya Hosp, Dept Gynecol & Obstet, Changsha, Peoples R China
关键词
ovarian serous cystadenocarcinoma; RNA-binding proteins; prognostic model; overall survival; bioinformatics; MYOCARDIAL-INFARCTION; VARIANT RS1048990; CANCER; PSMA6; IDENTIFICATION; ASSOCIATION; POLYMORPHISMS; DISEASE; GENES;
D O I
10.3389/fgene.2020.584624
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Ribonucleic acid-binding proteins (RBPs) are reportedly involved in tumor progression and recurrence; however, the functions and mechanisms of action of RBPs in ovarian serous cystadenocarcinoma (OSC) are not known. To address these issues, gene expression profiles of OSC tissues from The Cancer Genome Atlas (TCGA) and normal tissues from the Genotype-Tissue Expression database were compared in order to identify RBPs that are differentially expressed in OSC. We also analyzed the biological functions of these RBPs and their relationship to clinical outcome. There were 190 RBPs that were differentially expressed between OSC and normal tissues, including 93 that were upregulated and 97 that were downregulated. Five of the RBPs were used to construct a prediction model that was evaluated by univariate and multivariate Cox regression analyses. TCGA data were randomly divided into training and test cohorts, and further categorized into high- and low-risk groups according to risk score in the model. The overall survival (OS) of the high-risk group was shorter than that of the low-risk group (training cohort P = 0.0007596; test cohort P = 0.002219). The area under the receiver operating characteristic curve of the training and test cohorts was 0.701 and 0.638, respectively, demonstrating that the model had good predictive power. A nomogram was established to quantitatively describe the relationship between the five prognostic RBPs and OS in OSC, which can be useful for developing individualized management strategies for patients.
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页数:12
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