The complete chloroplast genome of Lilium distichum Nakai (Liliaceae)

被引：13

作者：

Hwang, Yoon-Jung ^{[1
]}

Lee, Sang-Choon ^{[2
,3
]}

Kim, Kyunghee ^{[2
,3
,4
]}

Choi, Beom-Soon ^{[4
]}

Park, Jee Young ^{[2
,3
]}

Yang, Tae-Jin ^{[2
,3
]}

Lim, Ki-Byung ^{[5
]}

机构：

[1] Sahmyook Univ, Dept Life Sci, Seoul, South Korea

[2] Seoul Natl Univ, Coll Agr & Life Sci, Plant Genom & Breeding Inst, Dept Plant Sci, Seoul, South Korea

[3] Seoul Natl Univ, Coll Agr & Life Sci, Res Inst Agr & Life Sci, Seoul 151921, South Korea

[4] Phyzen Genom Inst, Seoul, South Korea

[5] Kyungpook Natl Univ, Dept Hort Sci, Daegu 702701, South Korea

来源：

MITOCHONDRIAL DNA PART A | 2016年 / 27卷 / 06期

关键词：

Chloroplast; genome sequence; Lilium distichum; lily;

D O I：

10.3109/19401736.2015.1101591

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

Lilium distichum is a native lily species in Korea, northeastern China and far eastern Russia. The complete chloroplast genome sequence of L. distichum was generated by de novo assembly using whole genome next generation sequences. The chloroplast genome of L. distichum was 152 598 bp in length and divided into four distinct regions, such as large single copy region (82 031 bp), small single copy region (17 487 bp) and a pair of inverted repeat regions (26 540 bp). The genome annotation predicted a total of 112 genes, including 78 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. Phylogenetic analysis with the reported chloroplast genomes revealed that L. distichum is most closely related to L. superbum (Turk's-cap lily).

引用

页码：4633 / 4634

页数：2

共 10 条

[1]

Chen SR, 2013, PLOS ONE, V8, DOI [10.1371/journal.pone.0056380, 10.1371/journal.pone.0053662]

[2] Molecular phylogeny and genetic variation in the genus Lilium native to China based on the internal transcribed spacer sequences of nuclear ribosomal DNA [J].