A Prognostic Gene Signature for Hepatocellular Carcinoma

被引:10
作者
Chen, Rong [1 ]
Zhao, Meng [2 ]
An, Yanli [3 ,4 ]
Liu, Dongfang [3 ]
Tang, Qiusha [3 ]
Teng, Gaojun [4 ]
机构
[1] Zhongda Hosp, Dept Oncol, Nanjing, Peoples R China
[2] Zhengzhou Univ, Sch Basic Med, Zhengzhou, Peoples R China
[3] Southeast Univ, Med Sch, Nanjing, Peoples R China
[4] Southeast Univ, Dept Radiol, Med Sch, Nanjing, Peoples R China
基金
中国国家自然科学基金; 国家重点研发计划;
关键词
hepatocellular carcinoma; bioinformatics analysis; immune-related prognostic genes; immune cells; gene signature; CELL CARCINOMA; RECEPTOR CCR3; EXPRESSION; MUTATIONS; TP53; S100A8; SURVIVAL; P53; IDENTIFICATION; SURVEILLANCE;
D O I
10.3389/fonc.2022.841530
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Hepatocellular carcinoma is the third most common cause of cancer-related deaths in China and immune-based therapy can improve patient outcomes. In this study, we investigated the relationship between immunity-associated genes and hepatocellular carcinoma from the prognostic perspective. The data downloaded from The Cancer Genome Atlas Liver Hepatocellular Carcinoma (TCGA-LIHC) and the Gene Expression Omnibus (GEO) was screened for gene mutation frequency using the maftools package. Immunity-associated eight-gene signature with strong prognostic ability was constructed and proved as an independent predictor of the patient outcome in LIHC. Seven genes in the immune-related eight-gene signature were strongly associated with the infiltration of M0 macrophages, resting mast cells, and regulatory T cells. Our research may provide clinicians with a quantitative method to predict the prognosis of patients with liver cancer, which can assist in the selection of the optimal treatment plan.
引用
收藏
页数:11
相关论文
共 79 条
[31]   Immune surveillance by the liver [J].
Jenne, Craig N. ;
Kubes, Paul .
NATURE IMMUNOLOGY, 2013, 14 (10) :996-1006
[32]   CCL24 contributes to HCC malignancy via RhoB- VEGFA-VEGFR2 angiogenesis pathway and indicates poor prognosis [J].
Jin, Lei ;
Liu, Wei-Ren ;
Tian, Meng-Xin ;
Jiang, Xi-Fei ;
Wang, Han ;
Zhou, Pei-Yun ;
Ding, Zhen-Bin ;
Peng, Yuan-Fei ;
Dai, Zhi ;
Qiu, Shuang-Jian ;
Zhou, Jian ;
Fan, Jia ;
Shi, Ying-Hong .
ONCOTARGET, 2017, 8 (03) :5135-5148
[33]   Up-regulation of functional chemokine receptor CCR3 in human renal cell carcinoma [J].
Jöhrer, K ;
Zelle-Rieser, C ;
Perathoner, A ;
Moser, P ;
Hager, M ;
Ramoner, R ;
Gander, H ;
Höltl, L ;
Bartsch, G ;
Greil, R ;
Thurnher, M .
CLINICAL CANCER RESEARCH, 2005, 11 (07) :2459-2465
[34]   Mutational landscape and significance across 12 major cancer types [J].
Kandoth, Cyriac ;
McLellan, Michael D. ;
Vandin, Fabio ;
Ye, Kai ;
Niu, Beifang ;
Lu, Charles ;
Xie, Mingchao ;
Zhang, Qunyuan ;
McMichael, Joshua F. ;
Wyczalkowski, Matthew A. ;
Leiserson, Mark D. M. ;
Miller, Christopher A. ;
Welch, John S. ;
Walter, Matthew J. ;
Wendl, Michael C. ;
Ley, Timothy J. ;
Wilson, Richard K. ;
Raphael, Benjamin J. ;
Ding, Li .
NATURE, 2013, 502 (7471) :333-+
[35]   KEGG: Kyoto Encyclopedia of Genes and Genomes [J].
Kanehisa, M ;
Goto, S .
NUCLEIC ACIDS RESEARCH, 2000, 28 (01) :27-30
[36]   Functional expression of the eotaxin receptor CCR3 in CD30+ cutaneous T-cell lymphoma [J].
Kleinhans, M ;
Tun-Kyi, A ;
Gilliet, M ;
Kadin, ME ;
Dummer, R ;
Burg, G ;
Nestle, FO .
BLOOD, 2003, 101 (04) :1487-1493
[37]  
Koh HM, 2019, J PATHOL TRANSL MED, V53, P13, DOI [10.4132/jptm.2018.11.12, 10.7652/xjtuxb201903003]
[38]   Immunogenic Cell Death in Cancer Therapy [J].
Kroemer, Guido ;
Galluzzi, Lorenzo ;
Kepp, Oliver ;
Zitvogel, Laurence .
ANNUAL REVIEW OF IMMUNOLOGY, VOL 31, 2013, 31 :51-72
[39]   Lect2 Controls Inflammatory Monocytes to Constrain the Growth and Progression of Hepatocellular Carcinoma [J].
L'Hermitte, Antoine ;
Pham, Sandrine ;
Cadoux, Mathilde ;
Couchy, Gabrielle ;
Caruso, Stefano ;
Anson, Marie ;
Crain-Denoyelle, Anne-Marie ;
Celton-Morizur, Severine ;
Yamagoe, Satoshi ;
Zucman-Rossi, Jessica ;
Desdouets, Chantal ;
Couty, Jean-Pierre .
HEPATOLOGY, 2019, 69 (01) :160-178
[40]   Familial Breast Cancer [J].
Lalloo, F. ;
Evans, D. G. .
CLINICAL GENETICS, 2012, 82 (02) :105-114