Functional Genomics in Pancreatic β Cells: Recent Advances in Gene Deletion and Genome Editing Technologies for Diabetes Research

被引:16
作者
Hu, Ming [1 ]
Cherkaoui, Ines [1 ]
Misra, Shivani [2 ]
Rutter, Guy A. [1 ]
机构
[1] Imperial Coll London, Fac Med, Sect Cell Biol & Funct Genom, London, England
[2] Imperial Coll London, Fac Med, Dept Metab Digest & Reprod, Metab Med, London, England
基金
英国惠康基金; 欧盟地平线“2020”; 英国生物技术与生命科学研究理事会; 英国医学研究理事会;
关键词
genome editing; beta cell; genome-wide association studies; maturity onset of diabetes of the young; stem cells; mouse models; CONDITIONAL KNOCKOUT MICE; PLURIPOTENT STEM-CELLS; NUCLEIC-ACID DETECTION; ZINC TRANSPORTER ZNT8; OF-FUNCTION MUTATIONS; WIDE CRISPR SCREEN; TRANSCRIPTION FACTORS; INSULIN-SECRETION; HOMOLOGOUS RECOMBINATION; GLUCOSE-HOMEOSTASIS;
D O I
10.3389/fendo.2020.576632
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
The inheritance of variants that lead to coding changes in, or the mis-expression of, genes critical to pancreatic beta cell function can lead to alterations in insulin secretion and increase the risk of both type 1 and type 2 diabetes. Recently developed clustered regularly interspaced short palindromic repeats (CRISPR/Cas9) gene editing tools provide a powerful means of understanding the impact of identified variants on cell function, growth, and survival and might ultimately provide a means, most likely after the transplantation of genetically "corrected" cells, of treating the disease. Here, we review some of the disease-associated genes and variants whose roles have been probed up to now. Next, we survey recent exciting developments in CRISPR/Cas9 technology and their possible exploitation for beta cell functional genomics. Finally, we will provide a perspective as to how CRISPR/Cas9 technology may find clinical application in patients with diabetes.
引用
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页数:20
相关论文
共 281 条
[1]   RNA targeting with CRISPR-Cas13 [J].
Abudayyeh, Omar O. ;
Gootenberg, Jonathan S. ;
Essletzbichler, Patrick ;
Han, Shuo ;
Joung, Julia ;
Belanto, Joseph J. ;
Verdine, Vanessa ;
Cox, David B. T. ;
Kellner, Max J. ;
Regev, Aviv ;
Lander, Eric S. ;
Voytas, Daniel F. ;
Ting, Alice Y. ;
Zhang, Feng .
NATURE, 2017, 550 (7675) :280-+
[2]   C2c2 is a single-component programmable RNA-guided RNA-targeting CRISPR effector [J].
Abudayyeh, Omar O. ;
Gootenberg, Jonathan S. ;
Konermann, Silvana ;
Joung, Julia ;
Slaymaker, Ian M. ;
Cox, David B. T. ;
Shmakov, Sergey ;
Makarova, Kira S. ;
Semenova, Ekaterina ;
Minakhin, Leonid ;
Severinov, Konstantin ;
Regev, Aviv ;
Lander, Eric S. ;
Koonin, Eugene V. ;
Zhang, Feng .
SCIENCE, 2016, 353 (6299)
[3]   High-fidelity Glucagon-CreER mouse line generated by CRISPR-Cas9 assisted gene targeting [J].
Ackermann, Amanda M. ;
Zhang, Jia ;
Heller, Aryel ;
Briker, Anna ;
Kaestner, Klaus H. .
MOLECULAR METABOLISM, 2017, 6 (03) :236-244
[4]   Novel subgroups of adult-onset diabetes and their association with outcomes: a data-driven cluster analysis of six variables [J].
Ahlqvist, Emma ;
Storm, Petter ;
Karajamaki, Annemari ;
Martinell, Mats ;
Dorkhan, Mozhgan ;
Carlsson, Annelie ;
Vikman, Petter ;
Prasad, Rashmi B. ;
Aly, Dina Mansour ;
Almgren, Peter ;
Wessman, Ylva ;
Shaat, Nael ;
Spegel, Peter ;
Mulder, Hindrik ;
Lindholm, Eero ;
Melander, Olle ;
Hansson, Ola ;
Malmqvist, Ulf ;
Lernmark, Ake ;
Lahti, Kaj ;
Forsen, Tom ;
Tuomi, Tiinamaija ;
Rosengren, Anders H. ;
Groop, Leif .
LANCET DIABETES & ENDOCRINOLOGY, 2018, 6 (05) :361-369
[5]   Long-Range Chromatin Interactions Drive Mutant TERT Promoter Activation [J].
Akincilar, Semih Can ;
Khattar, Ekta ;
Boon, Priscilla Li Shan ;
Unal, Bilal ;
Fullwood, Melissa Jane ;
Tergaonkar, Vinay .
CANCER DISCOVERY, 2016, 6 (11) :1276-1291
[6]   GATA6 haploinsufficiency causes pancreatic agenesis in humans [J].
Allen, Hana Lango ;
Flanagan, Sarah E. ;
Shaw-Smith, Charles ;
De Franco, Elisa ;
Akerman, Ildem ;
Caswell, Richard ;
Ferrer, Jorge ;
Hattersley, Andrew T. ;
Ellard, Sian .
NATURE GENETICS, 2012, 44 (01) :20-22
[7]   Maturity-onset diabetes of the young (MODY): an update [J].
Anik, Ahmet ;
Catli, Gonul ;
Abaci, Ayhan ;
Bober, Ece .
JOURNAL OF PEDIATRIC ENDOCRINOLOGY & METABOLISM, 2015, 28 (3-4) :251-263
[8]   Search-and-replace genome editing without double-strand breaks or donor DNA [J].
Anzalone, Andrew V. ;
Randolph, Peyton B. ;
Davis, Jessie R. ;
Sousa, Alexander A. ;
Koblan, Luke W. ;
Levy, Jonathan M. ;
Chen, Peter J. ;
Wilson, Christopher ;
Newby, Gregory A. ;
Raguram, Aditya ;
Liu, David R. .
NATURE, 2019, 576 (7785) :149-+
[9]   Insulin mutations impair beta-cell development in a patient-derived iPSC model of neonatal diabetes [J].
Balboa, Diego ;
Saarimaki-Vire, Jonna ;
Borshagovski, Daniel ;
Survila, Mantas ;
Lindholm, Paivi ;
Galli, Emilia ;
Eurola, Solja ;
Ustinov, Jarkko ;
Grym, Heli ;
Huopio, Hanna ;
Partanen, Juha ;
Wartiovaara, Kirmo ;
Otonkoski, Timo .
ELIFE, 2018, 7
[10]   Concise Review: Human Pluripotent Stem Cells for the Modeling of Pancreatic β-Cell Pathology [J].
Balboa, Diego ;
Saarimaki-Vire, Jonna ;
Otonkoski, Timo .
STEM CELLS, 2019, 37 (01) :33-41