Analysis of factors that induce cysteine bonding state

被引：5
|
作者：
Jahandideh, Samad [1 ]
Hoseini, Somayyeh [2 ]
Jahandideh, Mina [3 ]
Hoseini, Afsaneh [4 ]
Yazdi, Ali Salehzadeh [5 ]
机构：
[1] Shiraz Univ Med Sci, Dept Med Phys, Shiraz, Iran
[2] Tabriz Univ Med Sci, Div Genet, Dept Biochem, Tabriz, Iran
[3] Vali E Asr Univ, Fac Sci, Dept Math, Rafsanjan, Iran
[4] Islamic Azad Univ Arak, Dept Comp Engn, Arak, Iran
[5] Univ Tehran, Dept Biochem & Biophys, Tehran, Iran
来源：
COMPUTERS IN BIOLOGY AND MEDICINE | 2009年 / 39卷 / 04期
关键词：
Cysteine bonding state; Sequence analysis; Singlet local propensity (SLP); Doublet local propensity (DLP); PREDICTION; PROTEINS;
D O I：
10.1016/j.compbiomed.2009.01.006
中图分类号：
Q [生物科学];
学科分类号：
07 ; 0710 ; 09 ;
摘要：
Regarding the fact that the protein structure is principally encoded in its sequence, investigating the bonding state of cysteine has gained a great deal of attention due to its significance in the formation of protein structure. Due to lack of evident influence of free cysteines on the protein structure, it may be expected that only half-cystines convey encoded information. The results obtained from the analysis of amino acid distribution in proximity of both states of cysteines explicitly indicated that perquisite information for inducing cysteine bonding state is present even in the flanking amino acid sequences of free cysteines. (c) 2009 Elsevier Ltd. All rights reserved.
引用
收藏
页码：332 / 339
页数：8
相关论文
共 50 条
  • [1] Analysis of factors that induce cysteine bonding state (vol 39, pg 332, 2009)
    Karami, Zahra
    Abdolmaleki, Parviz
    Rezaei, Mohammad Ali
    Jahandideh, Samad
    Asadabadi, Ebrahim Barzegari
    COMPUTERS IN BIOLOGY AND MEDICINE, 2010, 40 (05) : 543 - 543
  • [2] PREDICTION OF THE DISULFIDE-BONDING STATE OF CYSTEINE IN PROTEINS
    MUSKAL, SM
    HOLBROOK, SR
    KIM, SH
    PROTEIN ENGINEERING, 1990, 3 (08): : 667 - 672
  • [3] DISULFIND: a disulfide bonding state and cysteine connectivity prediction server
    Ceroni, Alessio
    Passerini, Andrea
    Vullo, Alessandro
    Frasconi, Paolo
    NUCLEIC ACIDS RESEARCH, 2006, 34 : W177 - W181
  • [4] Prediction of the Bonding State of Cysteine Residues in Proteins with Machine-Learning Methods
    Savojardo, Castrense
    Fariselli, Piero
    Martelli, Pier Luigi
    Shukla, Priyank
    Casadio, Rita
    COMPUTATIONAL INTELLIGENCE METHODS FOR BIOINFORMATICS AND BIOSTATISTICS, 2011, 6685 : 98 - 111
  • [5] Role of evolutionary information in predicting the disulfide-bonding state of cysteine in proteins
    Fariselli, P
    Riccobelli, P
    Casadio, R
    PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 1999, 36 (03) : 340 - 346
  • [6] Influence factors on bonding materials by solid state diffusion
    Tsakiris, Violeta
    Lucaci, Mariana
    Leonat, Lucia
    Alecu, Georgeta
    REVISTA ROMANA DE MATERIALE-ROMANIAN JOURNAL OF MATERIALS, 2008, 38 (02): : 152 - 156
  • [7] Analysis of factors that induce memory T cells
    Soh, Tetsuyoshi
    Oki, Yutaro
    Uchiumi, Fumiaki
    Kishimoto, Hidehiro
    JOURNAL OF IMMUNOLOGY, 2013, 190
  • [8] Dissecting Bonding Interactions in Cysteine Dimers
    Gomez, Santiago
    Gomez, Sara
    David, Jorge
    Guerra, Doris
    Cappelli, Chiara
    Restrepo, Albeiro
    MOLECULES, 2022, 27 (24):
  • [9] AN ANALYSIS OF FACTORS THAT INDUCE HIBERNATION IN SYRIAN-HAMSTERS
    UEDA, S
    IBUKA, N
    PHYSIOLOGY & BEHAVIOR, 1995, 58 (04) : 653 - 657
  • [10] Environmental and physico-chemical factors induce VBNC state in Listeria monocytogenes
    Besnard, V
    Federighi, M
    Declerq, E
    Jugiau, F
    Cappelier, JM
    VETERINARY RESEARCH, 2002, 33 (04) : 359 - 370
12345