A genome-wide association study yields five novel thyroid cancer risk loci

被引:119
|
作者
Gudmundsson, Julius [1 ]
Thorleifsson, Gudmar [1 ]
Sigurdsson, Jon K. [1 ]
Stefansdottir, Lilja [1 ]
Jonasson, Jon G. [2 ,3 ,4 ]
Gudjonsson, Sigurjon A. [1 ]
Gudbjartsson, Daniel F. [1 ]
Masson, Gisli [1 ]
Johannsdottir, Hrefna [1 ]
Halldorsson, Gisli H. [1 ]
Stacey, Simon N. [1 ]
Helgason, Hannes [1 ,5 ]
Sulem, Patrick [1 ]
Senter, Leigha [6 ]
He, Huiling [7 ]
Liyanarachchi, Sandya [7 ]
Ringel, Matthew D. [8 ]
Aguillo, Esperanza [9 ]
Panadero, Angeles [10 ]
Prats, Enrique [11 ]
Garcia-Castano, Almudena [12 ]
De Juan, Ana [12 ]
Rivera, Fernando [12 ]
Xu, Li [13 ]
Kiemeney, Lambertus A. [14 ]
Eyjolfsson, Gudmundur I. [15 ]
Sigurdardottir, Olof [16 ]
Olafsson, Isleifur [2 ]
Kristvinsson, Hoskuldur [2 ]
Netea-Maier, Romana T. [17 ]
Jonsson, Thorvaldur [2 ,3 ]
Mayordomo, Jose I. [18 ]
Plantinga, Theo S. [19 ]
Hjartarson, Hannes [2 ]
Hrafnkelsson, Jon [2 ]
Sturgis, Erich M. [13 ]
Thorsteinsdottir, Unnur [1 ,3 ]
Rafnar, Thorunn [1 ]
de la Chapelle, Albert [7 ]
Stefansson, Kari [1 ,3 ]
机构
[1] Amgen Inc, DeCODF Genet, IS-101 Reykjavik, Iceland
[2] Landspitali Univ Hosp, IS-101 Reykjavik, Iceland
[3] Univ Iceland, Fac Med, IS-101 Reykjavik, Iceland
[4] Iceland Canc Registry, IS-105 Reykjavik, Iceland
[5] Univ Iceland, Sch Engn & Nat Sci, IS-101 Reykjavik, Iceland
[6] Ohio State Univ, Ctr Comprehens Canc, Div Human Genet, Columbus, OH 43210 USA
[7] Ohio State Univ, Ctr Comprehens Canc, Dept Canc Biol & Genet, Columbus, OH 43210 USA
[8] Ohio State Univ, Div Endocrinol Diabet & Metab, Columbus, OH 43210 USA
[9] Univ Hosp, Div Endocrinol, Zaragoza 50009, Spain
[10] Ciudad Coria Hosp, Div Med Oncol, Coria 10800, Spain
[11] Univ Hosp, Div Nucl Med, Zaragoza 50009, Spain
[12] Marques Valdecilla Univ Hosp, Div Med Oncol, Santander 39008, Spain
[13] Univ Texas MD Anderson Canc Ctr, Dept Head & Neck Surg, Houston, TX 77030 USA
[14] Radboud Univ Nijmegen, Med Ctr, Radboud Inst Hlth Sci, NL-6500 HB Nijmegen, Netherlands
[15] Lab Mjodd, IS-109 Reykjavik, Iceland
[16] Akureyri Hosp, Dept Clin Biochem, IS-600 Akureyri, Iceland
[17] Radboud Univ Nijmegen, Med Ctr, Radboud Inst Hlth Sci, Dept Internal Med,Div Endocrinol, NL-6500 HB Nijmegen, Netherlands
[18] Univ Colorado Hosp, Aurora, CO 80045 USA
[19] Radboud Univ Nijmegen, Med Ctr, Radboud Inst Mol Life Sci, Dept Pathol, NL-6500 HB Nijmegen, Netherlands
基金
美国国家卫生研究院;
关键词
SUSCEPTIBILITY LOCI; GENETIC-VARIANTS; COMMON VARIANTS; CARCINOMA; IDENTIFICATION; 9Q22.33; PROTEIN; FOXE1; DNA;
D O I
10.1038/ncomms14517
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The great majority of thyroid cancers are of the non-medullary type. Here we report findings from a genome-wide association study of non-medullary thyroid cancer, including in total 3,001 patients and 287,550 controls from five study groups of European descent. Our results yield five novel loci (all with P-combined <3 x 10(-8)): 1q42.2 (rs12129938 in PCNXL2), 3q26.2 (rs6793295 a missense mutation in LRCC34 near TERC), 5q22.1 (rs73227498 between NREP and EPB41L4A), 10q24.33 (rs7902587 near OBFC1), and two independently associated variants at 15q22.33 (rs2289261 and rs56062135; both in SMAD3). We also confirm recently published association results from a Chinese study of a variant on 5p15.33 (rs2736100 near the TERT gene) and present a stronger association result for a moderately correlated variant (rs10069690; OR = 1.20, P = 3.2 x 10(-7)) based on our study of individuals of European ancestry. In combination, these results raise several opportunities for future studies of the pathogenesis of thyroid cancer.
引用
收藏
页数:8
相关论文
共 50 条
  • [1] A genome-wide association study yields five novel thyroid cancer risk loci
    Julius Gudmundsson
    Gudmar Thorleifsson
    Jon K. Sigurdsson
    Lilja Stefansdottir
    Jon G. Jonasson
    Sigurjon A. Gudjonsson
    Daniel F. Gudbjartsson
    Gisli Masson
    Hrefna Johannsdottir
    Gisli H. Halldorsson
    Simon N. Stacey
    Hannes Helgason
    Patrick Sulem
    Leigha Senter
    Huiling He
    Sandya Liyanarachchi
    Matthew D. Ringel
    Esperanza Aguillo
    Angeles Panadero
    Enrique Prats
    Almudena Garcia-Castaño
    Ana De Juan
    Fernando Rivera
    Li Xu
    Lambertus A. Kiemeney
    Gudmundur I. Eyjolfsson
    Olof Sigurdardottir
    Isleifur Olafsson
    Hoskuldur Kristvinsson
    Romana T. Netea-Maier
    Thorvaldur Jonsson
    Jose I. Mayordomo
    Theo S. Plantinga
    Hannes Hjartarson
    Jon Hrafnkelsson
    Erich M. Sturgis
    Unnur Thorsteinsdottir
    Thorunn Rafnar
    Albert de la Chapelle
    Kari Stefansson
    Nature Communications, 8
  • [2] Novel Genome-Wide Association Study-Based Candidate Loci for Differentiated Thyroid Cancer Risk
    Figlioli, Gisella
    Koehler, Aleksandra
    Chen, Bowang
    Elisei, Rossella
    Romei, Cristina
    Cipollini, Monica
    Cristaudo, Alfonso
    Bambi, Franco
    Paolicchi, Elisa
    Hoffmann, Per
    Herms, Stefan
    Kalemba, Michal
    Kula, Dorota
    Pastor, Susana
    Marcos, Ricard
    Velazquez, Antonia
    Jarzab, Barbara
    Landi, Stefano
    Hemminki, Kari
    Foersti, Asta
    Gemignani, Federica
    JOURNAL OF CLINICAL ENDOCRINOLOGY & METABOLISM, 2014, 99 (10): : E2084 - E2092
  • [3] Genome-wide association study identifies five risk loci for pernicious anemia
    Triin Laisk
    Maarja Lepamets
    Mariann Koel
    Erik Abner
    Reedik Mägi
    Nature Communications, 12
  • [4] Genome-wide association study identifies five risk loci for pernicious anemia
    Laisk, Triin
    Lepamets, Maarja
    Koel, Mariann
    Abner, Erik
    Metspalu, Andres
    Maegi, Reedik
    NATURE COMMUNICATIONS, 2021, 12 (01)
  • [5] A genome-wide association study for keratoconus identifies novel risk loci
    Burdon, Kathryn P.
    McComish, Bennet
    Baird, Paul N.
    Bykhovskaya, Yelena
    Richardson-Wynd, Andrea
    Willoughby, Colin E.
    Li, Xiaohui
    Sahebjada, Srujana
    MacGregor, Stuart
    Lucas, Sionne
    Rotter, Jerome I.
    Mills, Richard A.
    Hewitt, Alex W.
    Rabinowitz, Yaron
    Craig, Jamie E.
    INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE, 2018, 59 (09)
  • [6] Five endometrial cancer risk loci identified through genome-wide association analysis
    Cheng, Timothy H. T.
    Thompson, Deborah J.
    O'Mara, Tracy A.
    Painter, Jodie N.
    Glubb, Dylan M.
    Flach, Susanne
    Lewis, Annabelle
    French, Juliet D.
    Freeman-Mills, Luke
    Church, David
    Gorman, Maggie
    Martin, Lynn
    Hodgson, Shirley
    Webb, Penelope M.
    Attia, John
    Holliday, Elizabeth G.
    McEvoy, Mark
    Scott, Rodney J.
    Henders, Anjali K.
    Martin, Nicholas G.
    Montgomery, Grant W.
    Nyholt, Dale R.
    Ahmed, Shahana
    Healey, Catherine S.
    Shah, Mitul
    Dennis, Joe
    Fasching, Peter A.
    Beckmann, Matthias W.
    Hein, Alexander
    Ekici, Arif B.
    Hall, Per
    Czene, Kamila
    Darabi, Hatef
    Li, Jingmei
    Doerk, Thilo
    Duerst, Matthias
    Hillemanns, Peter
    Runnebaum, Ingo
    Amant, Frederic
    Schrauwen, Stefanie
    Zhao, Hui
    Lambrechts, Diether
    Depreeuw, Jeroen
    Dowdy, Sean C.
    Goode, Ellen L.
    Fridley, Brooke L.
    Winham, Stacey J.
    Njolstad, Tormund S.
    Salvesen, Helga B.
    Trovik, Jone
    NATURE GENETICS, 2016, 48 (06) : 667 - +
  • [7] Five endometrial cancer risk loci identified through genome-wide association analysis
    Timothy H T Cheng
    Deborah J Thompson
    Tracy A O'Mara
    Jodie N Painter
    Dylan M Glubb
    Susanne Flach
    Annabelle Lewis
    Juliet D French
    Luke Freeman-Mills
    David Church
    Maggie Gorman
    Lynn Martin
    Shirley Hodgson
    Penelope M Webb
    John Attia
    Elizabeth G Holliday
    Mark McEvoy
    Rodney J Scott
    Anjali K Henders
    Nicholas G Martin
    Grant W Montgomery
    Dale R Nyholt
    Shahana Ahmed
    Catherine S Healey
    Mitul Shah
    Joe Dennis
    Peter A Fasching
    Matthias W Beckmann
    Alexander Hein
    Arif B Ekici
    Per Hall
    Kamila Czene
    Hatef Darabi
    Jingmei Li
    Thilo Dörk
    Matthias Dürst
    Peter Hillemanns
    Ingo Runnebaum
    Frederic Amant
    Stefanie Schrauwen
    Hui Zhao
    Diether Lambrechts
    Jeroen Depreeuw
    Sean C Dowdy
    Ellen L Goode
    Brooke L Fridley
    Stacey J Winham
    Tormund S Njølstad
    Helga B Salvesen
    Jone Trovik
    Nature Genetics, 2016, 48 : 667 - 674
  • [8] A genome-wide association study of tag SNPs identify five novel colorectal cancer susceptibility loci
    Carvajal-Carmona, L.
    Webb, E.
    Jaeger, E.
    Broderick, P.
    Spain, S.
    Howarth, K.
    Pittman, A.
    Consortium, C. Corgi
    Houlston, R.
    Tomlinson, I.
    EJC SUPPLEMENTS, 2008, 6 (09): : 10 - 10
  • [9] Genome-wide Association Study Identifies Novel Risk Loci for Apical Periodontitis
    Petty, Lauren E.
    Silva, Renato
    de Souza, Leticia Chaves
    Vieira, Alexandre R.
    Shaw, Douglas M.
    Below, Jennifer E.
    Letra, Ariadne
    JOURNAL OF ENDODONTICS, 2023, 49 (10) : 1276 - 1288
  • [10] Genome-wide association study identifies five new breast cancer susceptibility loci
    Clare Turnbull
    Shahana Ahmed
    Jonathan Morrison
    David Pernet
    Anthony Renwick
    Mel Maranian
    Sheila Seal
    Maya Ghoussaini
    Sarah Hines
    Catherine S Healey
    Deborah Hughes
    Margaret Warren-Perry
    William Tapper
    Diana Eccles
    D Gareth Evans
    Maartje Hooning
    Mieke Schutte
    Ans van den Ouweland
    Richard Houlston
    Gillian Ross
    Cordelia Langford
    Paul D P Pharoah
    Michael R Stratton
    Alison M Dunning
    Nazneen Rahman
    Douglas F Easton
    Nature Genetics, 2010, 42 : 504 - 507