Structure-based design and discovery of potent and selective KDM5 inhibitors

被引:39
|
作者
Nie, Zhe [1 ]
Shi, Lihong [1 ]
Lai, Chon [1 ]
O'Connell, Shawn M. [1 ,3 ]
Xu, Jiangchun [1 ]
Stansfield, Ryan K. [1 ,4 ]
Hosfield, David J. [2 ]
Veal, James M. [1 ,4 ]
Stafford, Jeffrey A. [1 ,4 ]
机构
[1] Celgene Corp, 10300 Campus Point Dr,Suite 100, San Diego, CA 92121 USA
[2] Univ Chicago, Ben May Dept Canc Res, 929 East 57th St, Chicago, IL 60637 USA
[3] Pfizer Inc, Groton, CT 06340 USA
[4] Jecure Therapeut, San Diego, CA USA
关键词
Epigenetics; Histone lysine demethylase; KDM5; Tri-methylated H3K4; Structure-based design; HISTONE DEMETHYLASES; CANCER; CELLS; MELANOMA; TARGETS;
D O I
10.1016/j.bmcl.2018.03.083
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
Histone lysine demethylases (KDMs) play a key role in epigenetic regulation and KDM5A and KDM5B have been identified as potential anti-cancer drug targets. Using structural information from known KDM4 and KDM5 inhibitors, a potent series of pyrazolylpyridines was designed. Structure-activity relationship (SAR) exploration resulted in the identification of compound 33, an orally available, potent inhibitor of KDM5A/5B with promising selectivity. Potent cellular inhibition as measured by levels of tri-methylated H3K4 was demonstrated with compound 33 in the breast cancer cell line ZR-75-1. (C) 2018 Elsevier Ltd. All rights reserved.
引用
收藏
页码:1490 / 1494
页数:5
相关论文
共 50 条
  • [21] Structure-Based Drug Design of Novel, Potent, and Selective Azabenzimidazoles (ABI) as ATR Inhibitors
    Barsanti, Paul A.
    Pan, Yue
    Lu, Yipin
    Jain, Rama
    Cox, Matthew
    Aversa, Robert J.
    Dillon, Michael P.
    Ening, Robert
    Hu, Cheng
    Jin, Xianming
    Knapp, Mark
    Lan, Jiong
    Ramurthy, Savithri
    Rudewicz, Patrick
    Setti, Lina
    Subramanian, Sharadha
    Mathur, Michelle
    Taricani, Lorena
    Thomas, George
    Xiao, Linda
    Yue, Qin
    ACS MEDICINAL CHEMISTRY LETTERS, 2015, 6 (01): : 42 - 46
  • [22] Structure-Based Design of 2-Aminopyridine Oxazolidinones as Potent and Selective Tankyrase Inhibitors
    Huang, Hongbing
    Guzman-Perez, Angel
    Acquaviva, Lisa
    Berry, Virginia
    Bregman, Howard
    Dovey, Jennifer
    Gunaydin, Hakan
    Huang, Xin
    Huang, Liyue
    Saffran, Doug
    Serafino, Randy
    Schneider, Steve
    Wilson, Cindy
    DiMauro, Erin F.
    ACS MEDICINAL CHEMISTRY LETTERS, 2013, 4 (12): : 1218 - 1223
  • [23] Structure-Based Design of Potent and Selective Inhibitors of the Metabolic Kinase PFKFB3
    Boyd, Scott
    Brookfield, Joanna L.
    Critchlow, Susan E.
    Cumming, Iain A.
    Curtis, Nicola J.
    Debreczeni, Judit
    Degorce, Sebastien L.
    Donald, Craig
    Evans, Nicola J.
    Groombridge, Sam
    Hopcroft, Philip
    Jones, Neil P.
    Kettle, Jason G.
    Lamont, Scott
    Lewis, Hilary J.
    MacFaull, Philip
    McLoughlin, Sheila B.
    Rigoreau, Laurent J. M.
    Smith, James M.
    St-Gallay, Steve
    Stock, Julie K.
    Turnbull, Andrew P.
    Wheatley, Edward R.
    Winter, Jon
    Wingfield, Jonathan
    JOURNAL OF MEDICINAL CHEMISTRY, 2015, 58 (08) : 3611 - 3625
  • [24] Structure-based design of selective and potent G quadruplex-mediated telomerase inhibitors
    Read, M
    Harrison, RJ
    Romagnoli, B
    Tanious, FA
    Gowan, SH
    Reszka, AP
    Wilson, WD
    Kelland, LR
    Neidle, S
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (09) : 4844 - 4849
  • [25] Structure-based design of highly potent and selective Cdk4 inhibitors.
    Honma, T
    Hayashi, K
    Yoshizumi, T
    Ikeura, C
    Ikuta, M
    Suzuki-Takahashi, I
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2003, 226 : U437 - U438
  • [26] Structure-based design and discovery of orally bioavailable potent nonbenzamidine factor Xa inhibitors.
    Lam, PYS
    Li, RH
    Clark, CG
    Pinto, DJ
    Alexander, RS
    Rossi, KA
    Knabb, RM
    Wong, PC
    Aungst, BJ
    Bai, SA
    Wright, MR
    Wexler, RR
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2000, 219 : U31 - U31
  • [27] Design and evaluation of 1,7-naphthyridones as novel KDM5 inhibitors
    Labadie, Sharada S.
    Dragovich, Peter S.
    Cummings, Richard T.
    Deshmukh, Gauri
    Gustafson, Amy
    Han, Ning
    Harmange, Jean-Christophe
    Kiefer, James R.
    Li, Yue
    Liang, Jun
    Liederer, Bianca M.
    Liu, Yichin
    Manieri, Wanda
    Mao, Wiefeng
    Murray, Lesley
    Ortwine, Daniel F.
    Trojer, Patrick
    VanderPorten, Erica
    Vinogradova, Maia
    Wen, Li
    BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 2016, 26 (18) : 4492 - 4496
  • [28] The development of therapeutic inhibitors of the KDM5 histone demethylases
    Hudlebusch, Heidi R.
    Heinemann, Bo
    Nielsen, Jesper M.
    Kleine-Kohlbrecher, Daniela
    Hauge, Camilla
    Boesen, Thomas
    Labelle, Marc
    Gerlach, Lars-Ole
    Staller, Peter
    Birk, Peter
    CANCER RESEARCH, 2014, 74 (19)
  • [29] Structure-based discovery of new selective small-molecule sirtuin 5 inhibitors
    Liu, Sha
    Ji, Sen
    Yu, Zhu-Jun
    Wang, Hua-Li
    Cheng, Xu
    Li, Wei-Jian
    Jing, Li
    Yu, Yamei
    Chen, Qiang
    Yang, Ling-Ling
    Li, Guo-Bo
    Wu, Yong
    CHEMICAL BIOLOGY & DRUG DESIGN, 2018, 91 (01) : 257 - 268
  • [30] Structure-based discovery of potent inhibitors of human asparagine synthetase.
    Koroniak, L
    Gutierrez, JA
    Humkey, R
    Richards, NGJ
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2004, 227 : U903 - U903