Structure-based design and discovery of potent and selective KDM5 inhibitors

被引:39
作者
Nie, Zhe [1 ]
Shi, Lihong [1 ]
Lai, Chon [1 ]
O'Connell, Shawn M. [1 ,3 ]
Xu, Jiangchun [1 ]
Stansfield, Ryan K. [1 ,4 ]
Hosfield, David J. [2 ]
Veal, James M. [1 ,4 ]
Stafford, Jeffrey A. [1 ,4 ]
机构
[1] Celgene Corp, 10300 Campus Point Dr,Suite 100, San Diego, CA 92121 USA
[2] Univ Chicago, Ben May Dept Canc Res, 929 East 57th St, Chicago, IL 60637 USA
[3] Pfizer Inc, Groton, CT 06340 USA
[4] Jecure Therapeut, San Diego, CA USA
关键词
Epigenetics; Histone lysine demethylase; KDM5; Tri-methylated H3K4; Structure-based design; HISTONE DEMETHYLASES; CANCER; CELLS; MELANOMA; TARGETS;
D O I
10.1016/j.bmcl.2018.03.083
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
Histone lysine demethylases (KDMs) play a key role in epigenetic regulation and KDM5A and KDM5B have been identified as potential anti-cancer drug targets. Using structural information from known KDM4 and KDM5 inhibitors, a potent series of pyrazolylpyridines was designed. Structure-activity relationship (SAR) exploration resulted in the identification of compound 33, an orally available, potent inhibitor of KDM5A/5B with promising selectivity. Potent cellular inhibition as measured by levels of tri-methylated H3K4 was demonstrated with compound 33 in the breast cancer cell line ZR-75-1. (C) 2018 Elsevier Ltd. All rights reserved.
引用
收藏
页码:1490 / 1494
页数:5
相关论文
共 19 条
  • [1] Histone Lysine Methylation Dynamics: Establishment, Regulation, and Biological Impact
    Black, Joshua C.
    Van Rechem, Capucine
    Whetstine, Johnathan R.
    [J]. MOLECULAR CELL, 2012, 48 (04) : 491 - 507
  • [2] Blair Lauren P, 2011, Cancers (Basel), V3, P1383, DOI 10.3390/cancers3011383
  • [3] Inhibition of Histone Demethylases by 4-Carboxy-2,2′-Bipyridyl Compounds
    Chang, Kai-Hsuan
    King, Oliver N. F.
    Tumber, Anthony
    Woon, Esther C. Y.
    Heightman, Tom D.
    McDonough, Michael A.
    Schofield, Christopher J.
    Rose, Nathan R.
    [J]. CHEMMEDCHEM, 2011, 6 (05) : 759 - 764
  • [4] Chen Y.K., CHEN YK
  • [5] Identification of potent, selective KDM5 inhibitors
    Gehling, Victor S.
    Bellon, Steven F.
    Harmange, Jean-Christophe
    LeBlanc, Yves
    Poy, Florence
    Odate, Shobu
    Buker, Shane
    Lan, Fei
    Arora, Shilpi
    Williamson, Kaylyn E.
    Sandy, Peter
    Cummings, Richard T.
    Bailey, Christopher M.
    Bergeron, Louise
    Mao, Weifeng
    Gustafson, Amy
    Liu, Yichin
    VanderPorten, Erica
    Audia, James E.
    Trojer, Patrick
    Albrecht, Brian K.
    [J]. BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 2016, 26 (17) : 4350 - 4354
  • [6] Chromatin proteins and modifications as drug targets
    Helin, Kristian
    Dhanak, Dashyant
    [J]. NATURE, 2013, 502 (7472) : 480 - 488
  • [7] Structural Basis for KDM5A Histone Lysine Demethylase Inhibition by Diverse Compounds
    Horton, John R.
    Liu, Xu
    Gale, Molly
    Wu, Lizhen
    Shanks, John R.
    Zhang, Xing
    Webber, Philip J.
    Bell, Joshua S. K.
    Kales, Stephen C.
    Mott, Bryan T.
    Rai, Ganesha
    Jansen, Daniel J.
    Henderson, Mark J.
    Urban, Daniel J.
    Hall, Matthew D.
    Simeonov, Anton
    Maloney, David J.
    Johns, Margaret A.
    Fu, Haian
    Jadhav, Ajit
    Vertino, Paula M.
    Yan, Qin
    Cheng, Xiaodong
    [J]. CELL CHEMICAL BIOLOGY, 2016, 23 (07): : 769 - 781
  • [8] Epigenetic modifications in cancer
    Kanwal, R.
    Gupta, S.
    [J]. CLINICAL GENETICS, 2012, 81 (04) : 303 - 311
  • [9] Design and evaluation of 1,7-naphthyridones as novel KDM5 inhibitors
    Labadie, Sharada S.
    Dragovich, Peter S.
    Cummings, Richard T.
    Deshmukh, Gauri
    Gustafson, Amy
    Han, Ning
    Harmange, Jean-Christophe
    Kiefer, James R.
    Li, Yue
    Liang, Jun
    Liederer, Bianca M.
    Liu, Yichin
    Manieri, Wanda
    Mao, Wiefeng
    Murray, Lesley
    Ortwine, Daniel F.
    Trojer, Patrick
    VanderPorten, Erica
    Vinogradova, Maia
    Wen, Li
    [J]. BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 2016, 26 (18) : 4492 - 4496
  • [10] From a novel HTS hit to potent, selective, and orally bioavailable KDM5 inhibitors
    Liang, Jun
    Labadie, Sharada
    Zhang, Birong
    Ortwine, Daniel F.
    Patel, Snahel
    Vinogradova, Maia
    Kiefer, James R.
    Mauer, Till
    Gehling, Victor S.
    Harmange, Jean-Christophe
    Cummings, Richard
    Lai, Tommy
    Liao, Jiangpeng
    Zheng, Xiaoping
    Liu, Yichin
    Gustafson, Amy
    Van der Porten, Erica
    Mao, Weifeng
    Liederer, Bianca M.
    Deshmukh, Gauri
    An, Le
    Ran, Yingqing
    Classon, Marie
    Trojer, Patrick
    Dragovich, Peter S.
    Murray, Lesley
    [J]. BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 2017, 27 (13) : 2974 - 2981