DNA phylogeny reveals polyphyly of Phoma section Peyronellaea and multiple taxonomic novelties

被引:196
作者
Aveskamp, Maikel M. [1 ]
Verkley, Gerard J. M. [1 ]
de Gruyter, Johannes [2 ]
Murace, Monica A. [3 ]
Perello, Analia [3 ]
Woudenberg, Joyce H. C. [1 ]
Groenewald, Johannes Z. [1 ]
Crous, Pedro W. [1 ,4 ]
机构
[1] CBS Fungal Biodivers Ctr, NL-3584 CT Utrecht, Netherlands
[2] Plant Protect Serv, NL-6706 EA Wageningen, Netherlands
[3] Univ Nacl La Plata, Fac Ciencias Agr & Forestales, Buenos Aires, DF, Argentina
[4] Univ Wageningen & Res Ctr, Phytopathol Lab, NL-6709 PD Wageningen, Netherlands
关键词
actin; beta-tubulin; coelomycetes; dictyochlamydospores; ITS; multigene phylogeny; taxonomy; GENUS PHOMA; SP-NOV; MONOGRAPH; TAXA;
D O I
10.3852/08-199
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Species of the anamorph genus Phoma are commonly isolated from a wide range of ecological niches. They are notoriously difficult to identify due to the paucity of morphological features and the plasticity of these when cultivated on agar media. Species linked to Phoma section Peyronellaea are typified by the production of dictyochlamydospores and thus have additional characters to use in taxon delineation. However, the taxonomy of this section is still not fully understood. Furthermore the production of such chlamydospores also is known in some other sections of Phoma. DNA sequences were generated from three loci, namely ITS, actin, and beta-tubulin, to clarify the phylogeny of Phoma taxa that produce dictyochlamydospores. Results were unable to support section Peyronellaea as a taxonomic entity. Dictyochlamdospore formation appears to be a feature that developed, or was lost, many times during the evolution of Phoma. Furthermore, based on the multigene analyses, five new Phoma species could be delineated while a further five required taxonomic revision to be consistent with the genetic variation observed.
引用
收藏
页码:363 / 382
页数:20
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