DNA extraction from individual Phlebotomine sand flies (Diptera: Psychodidae: Phlebotominae) specimens: Which is the method with better results?

被引:6
作者
Franco Leonel, Joao Augusto [1 ,2 ]
Vioti, Geovanna [1 ,2 ]
Alves, Maria Luana [1 ,2 ]
da Silva, Diogo Tiago [1 ,2 ]
Meneghesso, Pedro Armando [1 ]
Benassi, Julia Cristina [1 ]
Pereira Spada, Julio Cesar [1 ,2 ]
Galvis-Ovallos, Fredy [3 ]
Soares, Rodrigo Martins [2 ,4 ]
Ferreira de Sousa Oliveira, Tricia Maria [1 ,2 ]
机构
[1] Univ Sao Paulo, Fac Anim Sci & Food Engn, Dept Vet Med, Lab Appl Prevent Vet Med, Pirassununga, SP, Brazil
[2] Univ Sao Paulo, Fac Vet Med & Anim Sci, Dept Prevent Vet Med & Anim Hlth, Postgrad Program Expt Epidemiol Appl Zoonoses, Pirassununga, SP, Brazil
[3] Univ Sao Paulo, Sch Publ Hlth, Lab Entomol Publ Hlth, Sao Paulo, SP, Brazil
[4] Univ Sao Paulo, Fac Vet Med & Anim Sci, Dept Prevent Vet Med & Anim Hlth, Pirassununga, SP, Brazil
基金
巴西圣保罗研究基金会;
关键词
Commercial extraction kits; In house extraction protocols; Molecular analysis; PCR; Sand fly; Vector; LEISHMANIA-INFANTUM; PCR DETECTION; ENDEMIC AREA; GENOMIC DNA; BLOOD; IDENTIFICATION; STANDARDIZATION; SANDFLIES; REGION; BRAZIL;
D O I
10.1016/j.exppara.2020.107981
中图分类号
R38 [医学寄生虫学]; Q [生物科学];
学科分类号
07 ; 0710 ; 09 ; 100103 ;
摘要
Phlebotomine sand flies (Diptera: Psychodidae: Phlebotominae) are a group of small insects of great concern for Public Health. These dipterous are intensely studied worldwide due to their involvement in the transmission of several pathogens, mainly Leishmania spp. parasites. Nowadays, the molecular tools have been included in Phlebotomine sand flies studies and has shown to be powerful tools in bioecology studies of these dipterous. Thereby, when molecular approaches are employed, there is a great concern regarding the amount and quality of the DNA obtained for analysis. Here, seven methods of DNA extraction, between commercial kits and in house extraction protocols were evaluated. We considered measure of DNA concentration and purity ratios using a spectrophotometer to check the performance of each protocol. In addition, the quality evaluation of the DNA extracted was performed by endogenous gene PCR on samples. The results of the seven evaluated DNA extraction protocols and their implications are discussed.
引用
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页数:7
相关论文
共 52 条
[1]  
[Anonymous], 1973, ENTOMOLOGIA MED PSYC
[2]   Plasmodium sp.:: Optimal protocols for PCR detection of low parasite numbers from mosquito (Anopheles sp.) samples [J].
Arez, AP ;
Lopes, D ;
Pinto, J ;
Franco, AS ;
Snounou, G ;
do Rosário, VE .
EXPERIMENTAL PARASITOLOGY, 2000, 94 (04) :269-272
[3]   Aspects of the ecology and behaviour of phlebotomines in endemic area for visceral leishmaniasis in State of Minas Gerais [J].
Barata, RA ;
França-Silva, JC ;
Mayrink, W ;
da Silva, JC ;
Prata, A ;
Lorosa, ES ;
Fiúza, JA ;
Gonçalves, CM ;
de Paula, KM ;
Dias, ES .
REVISTA DA SOCIEDADE BRASILEIRA DE MEDICINA TROPICAL, 2005, 38 (05) :421-425
[4]  
Bruford Michael W., 1998, P287
[5]  
Caldart ET, 2011, ACTA SCI VET, V39
[6]   Optimization of DNA Extraction from Individual Sand Flies for PCR Amplification [J].
Caligiuri, Lorena G. ;
Sandoval, Adolfo E. ;
Miranda, Jose C. ;
Pessoa, Felipe A. ;
Santini, Maria S. ;
Salomon, Oscar D. ;
Secundino, Nagila F. C. ;
McCarthy, Christina B. .
METHODS AND PROTOCOLS, 2019, 2 (02) :1-15
[7]   Bloodmeal Identification in Field-Collected Sand Flies From Casa Branca, Brazil, Using the Cytochrome b PCR Method [J].
Carvalho, G. M. L. ;
Rego, F. D. ;
Tanure, A. ;
Silva, A. C. P. ;
Dias, T. A. ;
Paz, G. F. ;
Andrade Filho, J. D. .
JOURNAL OF MEDICAL ENTOMOLOGY, 2017, 54 (04) :1049-1054
[8]   Standardization of DNA extraction from sand flies: Application to genotyping by next generation sequencing [J].
Casaril, Aline Etelvina ;
de Oliveira, Liliane Prado ;
Alonso, Diego Peres ;
de Oliveira, Everton Falcao ;
Gomes Barrios, Suellem Petilim ;
Moura Infran, Jucelei de Oliveira ;
Fernandes, Wagner de Souza ;
Oshiro, Elisa Teruya ;
Teixeira Ferreira, Alda Maria ;
Martins Ribolla, Paulo Eduardo ;
de Oliveira, Alessandra Gutierrez .
EXPERIMENTAL PARASITOLOGY, 2017, 177 :66-72
[9]  
Core Team R., 2020, R: A Language and Environment for Statistical Computing
[10]   Identification of phlebotomine sand fly blood meals by real-time PCR [J].
da Silva Sales, Kamila Gaudencio ;
Costa, Pietra Lemos ;
Silva de Morais, Rayana Carla ;
Otranto, Domenico ;
Brandao-Filho, Sinval Pinto ;
Cavalcanti, Milena de Paiva ;
Dantas-Torres, Filipe .
PARASITES & VECTORS, 2015, 8