Chryseobacterium hispalense sp nov., a plant-growth-promoting bacterium isolated from a rainwater pond in an olive plant nursery, and emended descriptions of Chryseobacterium defluvii, Chryseobacterium indolo genes, Chryseobacterium wanjuense and Chryseobacterium gregarium

被引:167
作者
del Carmen Montero-Calasanz, Maria [1 ,2 ]
Goeker, Markus [1 ]
Rohde, Manfred [3 ]
Sproeer, Cathrin [1 ]
Schumann, Peter [1 ]
Busse, Hans-Juergen [4 ]
Schmid, Michael [5 ]
Tindall, Brian J. [1 ]
Klenk, Hans-Peter [1 ]
Camacho, Maria [2 ]
机构
[1] Leibniz Inst DSMZ German Collect Microorganisms &, D-38124 Braunschweig, Germany
[2] Ctr Las Torres Tomejil, IFAPA Inst Invest & Formac Agr & Pesquera, Seville 41200, Spain
[3] HZI Helmholtz Ctr Infect Res, D-38124 Braunschweig, Germany
[4] Vet Med Univ, Inst Bakteriol Mykol & Hyg, A-1210 Vienna, Austria
[5] Helmholtz Zentrum Munchen, Res Unit Microbe Plant Interact, D-85764 Neuherberg, Germany
关键词
FLAVOBACTERIUM-MENINGOSEPTICUM; DNA HYBRIDIZATION; LIPID-COMPOSITION; RAPID METHOD; FATTY-ACIDS; RHIZOSPHERE; POLYAMINE; FAMILY;
D O I
10.1099/ijs.0.052456-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A novel non-motile, Gram-staining-negative, yellow-pigmented bacterium, designated AG13(T), isolated from a rain water pond at a plant nursery in Spain and characterized as a plant-growth-promoting bacterium, was investigated to determine its taxonomic status. The isolate grew best over a temperature range of 15-40 degrees C, at pH 5.0-8.0 and with 0-4% (w/v) NaCl. Chemotaxonomic and molecular characteristics of the isolate matched those described for members of the genus Chryseobacterium. The DNA G+C content of the novel strain was 37.2 mol%. The strain had a polyamine pattern with sym-homospermidine as the major compound and produced flexirubin-type pigments. MK-6 was the dominant menaquinone and the major cellular fatty acids were iso-C-15:0, C-17:1 omega 9c and iso-C-17:0 3-OH. The main polar lipids were phosphatidylethanolamine, aminolipids and several unidentified lipids. The 16S rRNA gene showed 92.0-97.2% sequence similarity with those of the members of the genus Chryseobacterium. Based on chemotaxonomic and phenotypic traits, and DNA-DNA hybridizations with the type strains of the most closely related species, the isolate is proposed to represent a novel species, Chryseobacterium hispalense, type strain AG13(T) (=DSM 25574(T)=CCUG 63019(T)). Emended descriptions of the species Chryseobacterium defluvii, Chryseobacterium indologenes, Chryseobacterium wanjuense and Chryseobacterium gregarium are also provided.
引用
收藏
页码:4386 / 4395
页数:10
相关论文
共 64 条
[1]   Characterization and Identification of Productivity-Associated Rhizobacteria in Wheat [J].
Anderson, Michael ;
Habiger, Joshua .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2012, 78 (12) :4434-4446
[2]  
[Anonymous], 2002, PAUP*. Phylogenetic Analysis Using Parsimony (*and other methods). Version 4
[3]   Chryseobacterium gregarium sp nov., isolated from decaying plant material [J].
Behrendt, Undine ;
Ulrich, Andreas ;
Schumann, Peter .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2008, 58 :1069-1074
[4]   Chryseobacterium luteum sp nov., associated with the phyllosphere of grasses [J].
Behrendt, Undine ;
Ulrich, Andreas ;
Sproeer, Cathrin ;
Schumann, Peter .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2007, 57 :1881-1885
[5]  
Bernardet J F., 2011, Bergey's manual of systematic bacteriology, V4, P180
[6]  
Bernardet JF, 2002, INT J SYST EVOL MICR, V52, P1049, DOI [10.1099/ijs.0.02136-0, 10.1099/00207713-52-3-1049]
[7]  
BLIGH EG, 1959, CAN J BIOCHEM PHYS, V37, P911
[8]   Twenty-One Genome Sequences from Pseudomonas Species and 19 Genome Sequences from Diverse Bacteria Isolated from the Rhizosphere and Endosphere of Populus deltoides [J].
Brown, Steven D. ;
Utturkar, Sagar M. ;
Klingeman, Dawn M. ;
Johnson, Courtney M. ;
Martin, Stanton L. ;
Land, Miriam L. ;
Lu, Tse-Yuan S. ;
Schadt, Christopher W. ;
Doktycz, Mitchel J. ;
Pelletier, Dale A. .
JOURNAL OF BACTERIOLOGY, 2012, 194 (21) :5991-5993
[9]  
BUSSE J, 1988, SYST APPL MICROBIOL, V11, P1
[10]   Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis [J].
Castresana, J .
MOLECULAR BIOLOGY AND EVOLUTION, 2000, 17 (04) :540-552