Theoretical Design of Bioinspired Macromolecular Electrets Based on Anthranilamide Derivatives

被引:26
作者
Ashraf, M. K. [1 ]
Pandey, Rajeev R. [1 ]
Lake, Roger K. [1 ]
Millare, Brent [2 ]
Gerasimenko, Alexander A. [2 ]
Bao, Duoduo [2 ]
Vullev, Valentine I. [2 ]
机构
[1] Univ Calif Riverside, Dept Elect Engn, Riverside, CA 92521 USA
[2] Univ Calif Riverside, Dept Bioengn, Riverside, CA 92521 USA
基金
美国国家科学基金会;
关键词
anthranilides; electrets; DFT; molecular doping; MOLECULAR-ORBITAL METHODS; ALPHA-HELICAL PEPTIDES; SET MODEL CHEMISTRY; DIPOLE-MOMENT; CONFORMATIONAL BEHAVIOR; POLYPEPTIDE SOLUTIONS; DIELECTRIC-PROPERTIES; DISTANCE DEPENDENCE; TOTAL ENERGIES; PROTEINS;
D O I
10.1002/btpr.189
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Polypeptide helices possess considerable intrinsic dipole moments oriented along their axes. While for proline helices the dipoles originate solely from the ordered orientation of the amide bonds, for 3(10-) and alpha-helices the polarization resultant from the formation of hydrogen-bond network further increases the magnitude of the macromolecular dipoles. The enormous electric-field gradients, generated by the dipoles of a-helices (which amount to about 5 D per residue with 0.15 nm residue increments along the helix), play a crucial role in the selectivity and the transport properties of ion channels. The demonstration of dipole-induced rectification of vectorial charge transfer mediated by alpha-helices has opened a range of possibilities for applications of these macromolecules in molecular and biomolecular electronics. These biopolymers, however, possess relatively large bandgaps. As an alternative, we examined a series of synthetic macromolecules, aromatic oligo-ortho-amides, which form extended structures with amide bonds in ordered orientation, supported by a hydrogen-bond network. Unlike their biomolecular counterparts, the extended pi-conjugation of these macromolecules will produce bandgaps significantly smaller than the polypeptide bandgaps. Using ab initio density functional theory calculations, we modeled anthranilamide derivatives that are representative oligo-ortho-amide conjugates. Our calculations, indeed, showed intrinsic dipole moments oriented along the polymer axes and increasing with the increase in the length of the oligomers. Each anthranilamide residue contributed about 3 D to the vectorial macromolecular dipole. When we added electron donating (diethylamine) and electron withdrawing (nitro and trifluoromethyl) groups for n- and p-doping, respectively, we observed that: (1) proper positioning of the electron donating and withdrawing groups further polarized the aromatic residues, increasing the intrinsic dipole to about 4.5 D per residue; and (2) extension of the pi-conjugation over some of the doping groups narrowed the band gaps with as much as I eV. The investigated bioinspired systems offer alternatives for the development of broad range of organic electronic materials with nonlinear properties. (C) 2009 American Institute of Chemical Engineers Biotechnol. Prog., 25: 915-922, 2009
引用
收藏
页码:915 / 922
页数:8
相关论文
共 42 条
  • [1] [Anonymous], 2017, J MOL STRUCT, DOI DOI 10.1016/J.MOLSTRUC.2017.03.014
  • [2] Bond-mediated electron tunneling in ruthenium-modified high-potential iron-sulfur protein
    Babini, E
    Bertini, I
    Borsari, M
    Capozzi, F
    Luchinat, C
    Zhang, XY
    Moura, GLC
    Kurnikov, IV
    Beratan, DN
    Ponce, A
    Di Bilio, AJ
    Winkler, JR
    Gray, HB
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2000, 122 (18) : 4532 - 4533
  • [3] BAUER S, 2003, P IEEE ULTR S, V33, P370
  • [4] DENSITY-FUNCTIONAL THERMOCHEMISTRY .3. THE ROLE OF EXACT EXCHANGE
    BECKE, AD
    [J]. JOURNAL OF CHEMICAL PHYSICS, 1993, 98 (07) : 5648 - 5652
  • [5] ELECTRON-TUNNELING PATHWAYS IN PROTEINS
    BERATAN, DN
    ONUCHIC, JN
    WINKLER, JR
    GRAY, HB
    [J]. SCIENCE, 1992, 258 (5089) : 1740 - 1741
  • [6] Second order nonlinearity in oligoamides
    Bhattacharya, M
    Das, PK
    [J]. SYNTHETIC METALS, 2005, 155 (02) : 389 - 392
  • [7] Metal-assembled modular proteins: Toward functional protein design
    Case, MA
    Mclendon, GL
    [J]. ACCOUNTS OF CHEMICAL RESEARCH, 2004, 37 (10) : 754 - 762
  • [8] The structure of the potassium channel:: Molecular basis of K+ conduction and selectivity
    Doyle, DA
    Cabral, JM
    Pfuetzner, RA
    Kuo, AL
    Gulbis, JM
    Cohen, SL
    Chait, BT
    MacKinnon, R
    [J]. SCIENCE, 1998, 280 (5360) : 69 - 77
  • [9] X-ray structure of a CIC chloride channel at 3.0 Å reveals the molecular basis of anion selectivity
    Dutzler, R
    Campbell, EB
    Cadene, M
    Chait, BT
    MacKinnon, R
    [J]. NATURE, 2002, 415 (6869) : 287 - 294
  • [10] SYNTHESIS AND CONFORMATIONAL BEHAVIOR OF TRI-3-METHYLTRIANTHRANILIDES - A NEW EXAMPLE OF SPONTANEOUS RESOLUTION AND INCLUSION COMPOUND FORMATION ON CRYSTALLIZATION
    EDGE, SJ
    OLLIS, WD
    STEPHANATOU, JS
    STODDART, JF
    WILLIAMS, DJ
    WOODE, KA
    [J]. TETRAHEDRON LETTERS, 1981, 22 (23) : 2229 - 2232