A single-cell transcriptome atlas of glial diversity in the human hippocampus across the postnatal lifespan

被引:38
作者
Su, Yijing [1 ,2 ]
Zhou, Yi [1 ,2 ]
Bennett, Mariko L. [1 ,2 ,3 ]
Li, Shiying [1 ,2 ,4 ,5 ]
Carceles-Cordon, Marc [1 ,2 ,6 ]
Lu, Lu [1 ,2 ]
Huh, Sooyoung [1 ,2 ]
Jimenez-Cyrus, Dennisse [1 ,2 ]
Kennedy, Benjamin C. [7 ,8 ]
Kessler, Sudha K. [3 ,9 ]
Viaene, Angela N. [10 ]
Helbig, Ingo [3 ,11 ,12 ]
Gu, Xiaosong [4 ,5 ]
Kleinman, Joel E. [13 ,14 ]
Hyde, Thomas M. [13 ,14 ]
Weinberger, Daniel R. [13 ,14 ]
Nauen, David W. [15 ]
Song, Hongjun [1 ,2 ]
Ming, Guo-li [1 ,2 ]
机构
[1] Univ Penn, Perelman Sch Med, Dept Neurosci, Philadelphia, PA 19104 USA
[2] Univ Penn, Mahoney Inst Neurosci, Perelman Sch Med, Philadelphia, PA 19104 USA
[3] Childrens Hosp Philadelphia, Dept Pediat, Div Neurol, Philadelphia, PA 19104 USA
[4] Nantong Univ, Coinnovat Ctr Neuroregenerat, Key Lab Neuroregenerat Jiangsu, Nantong 226001, Jiangsu, Peoples R China
[5] Nantong Univ, Coinnovat Ctr Neuroregenerat, Minist Educ, Nantong 226001, Jiangsu, Peoples R China
[6] Univ Penn, Perelman Sch Med, Neurosci Grad Grp, Philadelphia, PA 19104 USA
[7] Childrens Hosp Philadelphia, Div Neurosurg, Philadelphia, PA 19104 USA
[8] Univ Penn, Perelman Sch Med, Dept Neurosurg, Philadelphia, PA 19104 USA
[9] Univ Penn, Perelman Sch Med, Dept Neurol, Philadelphia, PA 19104 USA
[10] Childrens Hosp Philadelphia, Dept Pathol & Lab Med, Dept Cell & Dev Biol, Philadelphia, PA 19104 USA
[11] Childrens Hosp Philadelphia, Epilepsy NeuroGenet Initiat ENGIN, Philadelphia, PA 19104 USA
[12] Childrens Hosp Philadelphia, Dept Biomed & Hlth Informat DBHi, Perelman Sch Med, Philadelphia, PA 19104 USA
[13] Johns Hopkins Univ, Lieber Inst Brain Dev, Dept Psychiat, Dept Neurol,Sch Med, Baltimore, MD 21205 USA
[14] Johns Hopkins Univ, Dept Psychiat, Sch Med, Baltimore, MD 21205 USA
[15] Johns Hopkins Univ, Dept Pathol, Sch Med, Baltimore, MD 21205 USA
基金
美国国家卫生研究院;
关键词
RNA-SEQ; MICROGLIA; EXPRESSION; METAANALYSIS; MECHANISMS; SIGNATURES; NEURONS; MOUSE;
D O I
10.1016/j.stem.2022.09.010
中图分类号
Q813 [细胞工程];
学科分类号
摘要
The molecular diversity of glia in the human hippocampus and their temporal dynamics over the lifespan remain largely unknown. Here, we performed single-nucleus RNA sequencing to generate a transcriptome atlas of the human hippocampus across the postnatal lifespan. Detailed analyses of astrocytes, oligodendro-cyte lineages, and microglia identified subpopulations with distinct molecular signatures and revealed their association with specific physiological functions, age-dependent changes in abundance, and disease rele-vance. We further characterized spatiotemporal heterogeneity of GFAP-enriched astrocyte subpopulations in the hippocampal formation using immunohistology. Leveraging glial subpopulation classifications as a reference map, we revealed the diversity of glia differentiated from human pluripotent stem cells and identi-fied dysregulated genes and pathological processes in specific glial subpopulations in Alzheimer's disease (AD). Together, our study significantly extends our understanding of human glial diversity, population dy-namics across the postnatal lifespan, and dysregulation in AD and provides a reference atlas for stem -cell-based glial differentiation.
引用
收藏
页码:1594 / +
页数:26
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