Specific serum and CSF microRNA profiles distinguish sporadic behavioural variant of frontotemporal dementia compared with Alzheimer patients and cognitively healthy controls

被引:62
作者
Denk, Johannes [1 ]
Oberhauser, Felix [1 ]
Kornhuber, Johannes [2 ]
Wiltfang, Jens [3 ]
Fassbender, Klaus [4 ]
Schroeter, Matthias L. [5 ,6 ]
Volk, Alexander E. [7 ]
Diehl-Schmid, Janine [8 ]
Prudlo, Johannes [9 ]
Danek, Adrian [10 ]
Landwehrmeyer, Bernhard [11 ]
Lauer, Martin [12 ]
Otto, Markus [11 ]
Jahn, Holger [1 ,13 ]
机构
[1] Univ Med Ctr Hamburg Eppendorf, Dept Psychiat & Psychotherapy, Hamburg, Germany
[2] Friedrich Alexander Univ Erlangen Nuremberg, Dept Psychiat & Psychotherapy, Erlangen, Germany
[3] Univ Med Ctr Goettingen, Dept Psychiat & Psychotherapy, Gottingen, Germany
[4] Saarland Univ, Dept Neurol, Homburg, Germany
[5] Univ Clin Leipzig, Clin Cognit Neurol, Leipzig, Germany
[6] Max Planck Inst Human Cognit & Brain Sci, Leipzig, Germany
[7] Univ Med Ctr Hamburg Eppendorf, Inst Human Genet, Hamburg, Germany
[8] Tech Univ Munich, Dept Psychiat, Munich, Germany
[9] Univ Rostock, Dept Neurol, Rostock, Germany
[10] Ludwig Maximilians Univ Munchen, Dept Neurol, Munich, Germany
[11] Univ Ulm, Dept Neurol, Ulm, Germany
[12] Univ Wurzburg, Dept Psychiat & Psychotherapy, Wurzburg, Germany
[13] AMEOS Klinikum, Heiligenhafen, Heiligenhafen, Germany
关键词
LOBAR DEGENERATION; MIRNA EXPRESSION; R PACKAGE; BIOMARKERS; DISEASE; TAU; MUTATIONS; DIAGNOSIS; CANCER; NEUROPATHOLOGY;
D O I
10.1371/journal.pone.0197329
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Information on circulating miRNAs in frontotemporal lobar degeneration is very limited and conflicting results have complicated an interpretation in Alzheimer's disease thus far. In the present study we I) collected samples from multiple clinical centers across Germany, II) defined 3 homogenous patient groups with high sample sizes (bvFTD n = 48, AD n = 48 and cognitively healthy controls n = 44), III) compared expression levels in both CSF and serum samples and IV) detected a limited set of miRNAs by using a MIQE compliant protocol based on SYBR-green miRCURY assays that have proven reliable to generate reproducible results. We included several quality controls that identified and reduced technical variation to increase the reliability of our data. We showed that the expression levels of circulating miRNAs measured in CSF did not correlate with levels in serum. Using cluster analysis we found expression pattern in serum that, in part, reflects the genomic organization and affiliation to a specific miRNA family and that were specifically altered in bvFTD, AD, and control groups. Applying factor analysis we identified a 3-factor model characterized by a miRNA signature that explained 80% of the variance classifying healthy controls with 97%, bvFTD with 77% and AD with 72% accuracy. MANOVA confirmed signals like miR-320a and miR-26b-5p at BH corrected significance that contributed most to discriminate bvFTD cases with 96% sensitivity and 90% specificity and AD cases with 89% sensitivity and specificity compared to healthy controls, respectively. Correlation analysis revealed that miRNAs from the 3-factor model also correlated with levels of protein biomarker amyloid-beta(1-42) and phosphorylated neurofilament heavy chain, indicating their potential role in the monitoring of progressive neuronal degeneration. Our data show that miRNAs can be reproducibly measured in serum and CSF without pre-amplification and that serum includes higher expressed signals that demonstrate an overall better ability to classify bvFTD, AD and healthy controls compared to signals detected in CSF.
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页数:23
相关论文
共 63 条
[1]   A blinded international study on the reliability of genetic testing for GGGGCC-repeat expansions in C9orf72 reveals marked differences in results among 14 laboratories [J].
Akimoto, Chizuru ;
Volk, Alexander E. ;
van Blitterswijk, Marka ;
Van den Broeck, Marleen ;
Leblond, Claire S. ;
Lumbroso, Serge ;
Camu, William ;
Neitzel, Birgit ;
Onodera, Osamu ;
van Rheenen, Wouter ;
Pinto, Susana ;
Weber, Markus ;
Smith, Bradley ;
Proven, Melanie ;
Talbot, Kevin ;
Keagle, Pamela ;
Chesi, Alessandra ;
Ratti, Antonia ;
van der Zee, Julie ;
Alstermark, Helena ;
Birve, Anna ;
Calini, Daniela ;
Nordin, Angelica ;
Tradowsky, Daniela C. ;
Just, Walter ;
Daoud, Hussein ;
Angerbauer, Sabrina ;
DeJesus-Hernandez, Mariely ;
Konno, Takuya ;
Lloyd-Jani, Anjali ;
de Carvalho, Mamede ;
Mouzat, Kevin ;
Landers, John E. ;
Veldink, Jan H. ;
Silani, Vincenzo ;
Gitler, Aaron D. ;
Shaw, Christopher E. ;
Rouleau, Guy A. ;
van den Berg, Leonard H. ;
Van Broeckhoven, Christine ;
Rademakers, Rosa ;
Andersen, Peter M. ;
Kubisch, Christian .
JOURNAL OF MEDICAL GENETICS, 2014, 51 (06) :419-424
[2]   Normalization of real-time quantitative reverse transcription-PCR data: A model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets [J].
Andersen, CL ;
Jensen, JL ;
Orntoft, TF .
CANCER RESEARCH, 2004, 64 (15) :5245-5250
[3]  
[Anonymous], 2014, BEST PRACTICES EXPLO
[4]   Mutations in progranulin cause tau-negative frontotemporal dementia linked to chromosome 17 [J].
Baker, Matt ;
Mackenzie, Ian R. ;
Pickering-Brown, Stuart M. ;
Gass, Jennifer ;
Rademakers, Rosa ;
Lindholm, Caroline ;
Snowden, Julie ;
Adamson, Jennifer ;
Sadovnick, A. Dessa ;
Rollinson, Sara ;
Cannon, Ashley ;
Dwosh, Emily ;
Neary, David ;
Melquist, Stacey ;
Richardson, Anna ;
Dickson, Dennis ;
Berger, Zdenek ;
Eriksen, Jason ;
Robinson, Todd ;
Zehr, Cynthia ;
Dickey, Chad A. ;
Crook, Richard ;
McGowan, Eileen ;
Mann, David ;
Boeve, Bradley ;
Feldman, Howard ;
Hutton, Mike .
NATURE, 2006, 442 (7105) :916-919
[5]   The wide genetic landscape of clinical frontotemporal dementia: systematic combined sequencing of 121 consecutive subjects [J].
Blauwendraat, Cornelis ;
Wilke, Carlo ;
Simon-Sanchez, Javier ;
Jansen, Iris E. ;
Reifschneider, Anika ;
Capell, Anja ;
Haass, Christian ;
Castillo-Lizardo, Melissa ;
Biskup, Saskia ;
Maetzler, Walter ;
Rizzu, Patrizia ;
Heutink, Peter ;
Synofzik, Matthis .
GENETICS IN MEDICINE, 2018, 20 (02) :240-249
[6]   Assessing sample and miRNA profile quality in serum and plasma or other biofluids [J].
Blondal, Thorarinn ;
Nielsen, Soren Jensby ;
Baker, Adam ;
Andreasen, Ditte ;
Mouritzen, Peter ;
Teilum, Maria Wrang ;
Dahlsveen, Ina K. .
METHODS, 2013, 59 (01) :S1-S6
[7]   Profiles of Extracellular miRNA in Cerebrospinal Fluid and Serum from Patients with Alzheimer's and Parkinson's Diseases Correlate with Disease Status and Features of Pathology [J].
Burgos, Kasandra ;
Malenica, Ivana ;
Metpally, Raghu ;
Courtright, Amanda ;
Rakela, Benjamin ;
Beach, Thomas ;
Shill, Holly ;
Adler, Charles ;
Sabbagh, Marwan ;
Villa, Stephen ;
Tembe, Waibhav ;
Craig, David ;
Van Keuren-Jensen, Kendall .
PLOS ONE, 2014, 9 (05)
[8]   The MIQE Guidelines: Minimum Information for Publication of Quantitative Real-Time PCR Experiments [J].
Bustin, Stephen A. ;
Benes, Vladimir ;
Garson, Jeremy A. ;
Hellemans, Jan ;
Huggett, Jim ;
Kubista, Mikael ;
Mueller, Reinhold ;
Nolan, Tania ;
Pfaffl, Michael W. ;
Shipley, Gregory L. ;
Vandesompele, Jo ;
Wittwer, Carl T. .
CLINICAL CHEMISTRY, 2009, 55 (04) :611-622
[9]   Network Topology Analysis of Post-Mortem Brain Microarrays Identifies More Alzheimer's Related Genes and MicroRNAs and Points to Novel Routes for Fighting with the Disease [J].
Chandrasekaran, Sreedevi ;
Bonchev, Danail .
PLOS ONE, 2016, 11 (01)
[10]   Characterization of microRNAs in serum: a novel class of biomarkers for diagnosis of cancer and other diseases [J].
Chen, Xi ;
Ba, Yi ;
Ma, Lijia ;
Cai, Xing ;
Yin, Yuan ;
Wang, Kehui ;
Guo, Jigang ;
Zhang, Yujing ;
Chen, Jiangning ;
Guo, Xing ;
Li, Qibin ;
Li, Xiaoying ;
Wang, Wenjing ;
Zhang, Yan ;
Wang, Jin ;
Jiang, Xueyuan ;
Xiang, Yang ;
Xu, Chen ;
Zheng, Pingping ;
Zhang, Juanbin ;
Li, Ruiqiang ;
Zhang, Hongjie ;
Shang, Xiaobin ;
Gong, Ting ;
Ning, Guang ;
Wang, Jun ;
Zen, Ke ;
Zhang, Junfeng ;
Zhang, Chen-Yu .
CELL RESEARCH, 2008, 18 (10) :997-1006