A Comprehensive Multi-Omic Approach Reveals a Relatively Simple Venom in a Diet Generalist, the Northern Short-Tailed Shrew, Blarina brevicauda

被引:9
|
作者
Hanf, Zachery R. [1 ]
Chavez, Andreas S. [1 ,2 ]
机构
[1] Ohio State Univ, Dept Evolut Ecol & Organismal Biol, Columbus, OH 43210 USA
[2] Ohio State Univ, Translat Data Analyt Inst, Columbus, OH 43210 USA
来源
GENOME BIOLOGY AND EVOLUTION | 2020年 / 12卷 / 07期
关键词
de novo genome assembly; long-read sequencing; transcriptomics; proteomics; shrews; venom; PHYLOGENETIC ANALYSIS; SUBSTITUTION MODELS; POSITIVE SELECTION; PHOSPHOLIPASE A(2); SEQUENCE ALIGNMENT; HIGH-ACCURACY; SNAKE-VENOMS; HOST-DEFENSE; EVOLUTION; IDENTIFICATION;
D O I
10.1093/gbe/evaa115
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Animals that use venom to feed on a wide diversity of prey may evolve a complex mixture of toxins to target a variety of physiological processes and prey-defense mechanisms. Blarina brevicauda, the northern short-tailed shrew, is one of few venomous mammals, and is also known to eat evolutionarily divergent prey. Despite their complex diet, earlier proteomic and transcriptomic studies of this shrew's venom have only identified two venom proteins. Here, we investigated with comprehensive molecular approaches whether B. brevicauda venom is more complex than previously understood. We generated de novo assemblies of a B. brevicauda genome and submaxillary-gland transcriptome, as well as sequenced the salivary proteome. Our findings show that B. brevicauda's venom composition is simple relative to their broad diet and is likely limited to seven proteins from six gene families. Additionally, we explored expression levels and rate of evolution of these venom genes and the origins of key duplications that led to toxin neofunctionalization. We also found three proteins that may be involved in endogenous self-defense. The possible synergism of the toxins suggests that vertebrate prey may be the main target of the venom. Further functional assays for all venom proteins on both vertebrate and invertebrate prey would provide further insight into the ecological relevance of venom in this species.
引用
收藏
页码:1148 / 1166
页数:19
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