Revisiting glycoside hydrolase family 20 β-N-acetyl-D-hexosaminidases: Crystal structures, physiological substrates and specific inhibitors

被引:42
作者
Liu, Tian [1 ]
Duan, Yanwei [1 ]
Yang, Qing [2 ]
机构
[1] Dalian Univ Technol, Sch Life Sci & Biotechnol, Dalian 116024, Peoples R China
[2] Dalian Univ Technol, State Key Lab Biol Plant Dis & Insect Pests, Dalian 116024, Peoples R China
基金
国家重点研发计划; 国家杰出青年科学基金;
关键词
beta-N-acetyl-D-hexosaminidase; Glycoside hydrolase; Crystal structure; Substrate; Catalytic mechanism; Inhibitor; Drug; Pesticide; HUMAN-MILK OLIGOSACCHARIDES; NAG-THIAZOLINE; BIOCHEMICAL-CHARACTERIZATION; BIFIDOBACTERIUM-BIFIDUM; ENZYMATIC-PROPERTIES; OSTRINIA-FURNACALIS; ASSISTED CATALYSIS; MOLECULAR-CLONING; D-GLUCOSAMINIDASE; GAINING INSIGHT;
D O I
10.1016/j.biotechadv.2018.03.013
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Glycoside hydrolase family 20 beta-N-acetyl-D-hexosaminidases (GH20s) catalyze the hydrolysis of glycosidic linkages in glycans, glycoproteins and glycolipids. The diverse substrates of GH20s account for their various roles in many important bioprocesses, such as glycoprotein modification, glycoconjugate metabolism, gamete recognition and chitin degradation in fungal cell walls and arthropod exoskeletons. Defects in human GH20s cause lysosomal storage diseases, Alzheimer's disease and osteoarthritis. Similarly, lower levels of GH20s arrest arthropod molting. Although GH20s are promising targets for drug and agrochemical development, designing bioactive molecules to target one specific enzyme is challenging because GH20s share a conserved catalytic mechanism. With the development of structural biology, the last two decades have witnessed a dramatic increase in crystallographic investigations of liganded and unliganded GH0s, providing core information for rational molecular designs. This critical review summarizes recent research advances in GH20s, with a focus on their structural basis of substrate specificity as well as on inhibitor design. As more crystal structures of targeted GH20s are determined and analyzed, dynamics of their catalysis and inhibition will also be elucidated, which will facilitate the development of new drugs, pesticides and agrochemicals.
引用
收藏
页码:1127 / 1138
页数:12
相关论文
共 111 条
[1]   Mechanism of Human Nucleocytoplasmic Hexosaminidase D [J].
Alteen, Matthew G. ;
Oehler, Verena ;
Nemcovicova, Ivana ;
Wilson, Iain B. H. ;
Vocadlo, David J. ;
Gloster, Tracey M. .
BIOCHEMISTRY, 2016, 55 (19) :2735-2747
[2]   Nine of 16 Stereoisomeric Polyhydroxylated Proline Amides Are Potent β-N-Acetylhexosaminidase Inhibitors [J].
Ayers, Benjamin J. ;
Glawar, Andreas F. G. ;
Martinez, R. Fernando ;
Ngo, Nigel ;
Liu, Zilei ;
Fleet, George W. J. ;
Butters, Terry D. ;
Nash, Robert J. ;
Yu, Chu-Yi ;
Wormald, Mark R. ;
Nakagawa, Shinpei ;
Adachi, Isao ;
Kato, Atsushi ;
Jenkinson, Sarah F. .
JOURNAL OF ORGANIC CHEMISTRY, 2014, 79 (08) :3398-3409
[3]   Crystal Structure of β-Hexosaminidase B in Complex with Pyrimethamine, a Potential Pharmacological Chaperone [J].
Bateman, Katherine S. ;
Cherney, Maia M. ;
Mahuran, Don J. ;
Tropak, Michael ;
James, Michael N. G. .
JOURNAL OF MEDICINAL CHEMISTRY, 2011, 54 (05) :1421-1429
[4]   Recent advances on structure, metabolism, and function of human milk oligosaccharides [J].
Bode, Lars .
JOURNAL OF NUTRITION, 2006, 136 (08) :2127-2130
[5]   N-acetylhexosamine triad in one molecule:: Chemoenzymatic introduction of 2-acetamido-2-deoxy-β-D-galactopyranosyluronic acid residue into a complex oligosaccharide [J].
Bojarova, Pavla ;
Krenek, Karel ;
Kuzma, Marek ;
Petraskova, Lucie ;
Bezouska, Karel ;
Namdjou, Darius-Jean ;
Elling, Lothar ;
Kren, Vladimir .
JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC, 2008, 50 (2-4) :69-73
[6]   Charged Hexosaminides as New Substrates for β-N-Acetylhexosaminidase-Catalyzed Synthesis of Immunomodulatory Disaccharides [J].
Bojarova, Pavla ;
Slamova, Kristyna ;
Krenek, Karel ;
Gazak, Radek ;
Kulik, Natallia ;
Ettrich, Ruediger ;
Pelantova, Helena ;
Kuzma, Marek ;
Riva, Sergio ;
Adamek, David ;
Bezouska, Karel ;
Kren, Vladimir .
ADVANCED SYNTHESIS & CATALYSIS, 2011, 353 (13) :2409-2420
[7]   Glycosidases in Carbohydrate Synthesis: When Organic Chemistry Falls Short [J].
Bojarova, Pavla ;
Kren, Vladimir .
CHIMIA, 2011, 65 (1-2) :65-70
[8]   The Nag1 N-acetylglucosaminidase of Trichoderma atroviride is essential for chitinase induction by chitin and of major relevance to biocontrol [J].
Brunner, K ;
Peterbauer, CK ;
Mach, RL ;
Lorito, M ;
Zeilinger, S ;
Kubicek, CP .
CURRENT GENETICS, 2003, 43 (04) :289-295
[9]   Synthesis of the enantiomers of XYLNAc and LYXNAc: comparison of β-N-acetylhexosaminidase inhibition by the 8 stereoisomers of 2-N-acetylamino-1,2,4-trideoxy-1,4-iminopentitols [J].
Crabtree, Elizabeth V. ;
Martinez, R. Fernando ;
Nakagawa, Shinpei ;
Adachi, Isao ;
Butters, Terry D. ;
Kato, Atsushi ;
Fleet, George W. J. ;
Glawar, Andreas F. G. .
ORGANIC & BIOMOLECULAR CHEMISTRY, 2014, 12 (23) :3932-3943
[10]   Stereoselective synthesis of 2-acetamido-1,2-dideoxynojirimycin (DNJNAc) and ureido-DNJNAc derivatives as new hexosaminidase inhibitors [J].
De la Fuente, Alex ;
Mena-Barragan, Teresa ;
Farrar-Tobar, Ronald A. ;
Verdaguer, Xavier ;
Garcia Fernandez, Jose M. ;
Ortiz Mellet, Carmen ;
Riera, Antoni .
ORGANIC & BIOMOLECULAR CHEMISTRY, 2015, 13 (23) :6500-6510