Local multidimensional scaling

被引:135
作者
Venna, Jarkko [1 ]
Kaski, Samuel [1 ]
机构
[1] Aalto Univ, Adapt Informat Res Ctr, FI-02015 Helsinki, Finland
基金
芬兰科学院;
关键词
information visualization; manifold extraction; multi-dimensional scaling (MDS); nonlinear dimensionality reduction; non-linear projection; gene expression; EXPRESSION;
D O I
10.1016/j.neunet.2006.05.014
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
In a visualization task, every nonlinear projection method needs to make a compromise between trustworthiness and continuity. In a trustworthy projection the visualized proximities hold in the original data as well, whereas a continuous projection visualizes all proximities of the original data. We show experimentally that one of the multidimensional scaling methods, curvilinear components analysis, is good at maximizing trustworthiness. We then extend it to focus on local proximities both in the input and output space, and to explicitly make a user-tunable parameterized compromise between trustworthiness and continuity. The new method compares favorably to alternative nonlinear projection methods. (c) 2006 Elsevier Ltd. All rights reserved.
引用
收藏
页码:889 / 899
页数:11
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