Microseed matrix screening for optimization in protein crystallization: what have we learned?

被引:102
作者
D'Arcy, Allan [1 ]
Bergfors, Terese [2 ]
Cowan-Jacob, Sandra W. [3 ]
Marsh, May [4 ]
机构
[1] Actel Pharmaceut Ltd, Basel, Switzerland
[2] Uppsala Univ, Dept Cell & Mol Biol, Uppsala, Sweden
[3] Novartis Inst Biomed Res, CH-4056 Basel, Switzerland
[4] Paul Scherrer Inst, Swiss Light Source, CH-5232 Villigen, Switzerland
来源
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS | 2014年 / 70卷
关键词
HOMOLOGOUS PROTEIN; CRYSTALS; NUCLEATION; GROWTH;
D O I
10.1107/S2053230X14015507
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Protein crystals obtained in initial screens typically require optimization before they are of X-ray diffraction quality. Seeding is one such optimization method. In classical seeding experiments, the seed crystals are put into new, albeit similar, conditions. The past decade has seen the emergence of an alternative seeding strategy: microseed matrix screening (MMS). In this strategy, the seed crystals are transferred into conditions unrelated to the seed source. Examples of MMS applications from in-house projects and the literature include the generation of multiple crystal forms and different space groups, better diffracting crystals and crystallization of previously uncrystallizable targets. MMS can be implemented robotically, making it a viable option for drug-discovery programs. In conclusion, MMS is a simple, time-and cost-efficient optimization method that is applicable to many recalcitrant crystallization problems.
引用
收藏
页码:1117 / 1126
页数:10
相关论文
共 40 条
[1]   Structure of arylamine N-acetyltransferase from Mycobacterium tuberculosis determined by cross-seeding with the homologous protein from M. marinum: triumph over adversity [J].
Abuhammad, Areej ;
Lowe, Edward D. ;
McDonough, Michael A. ;
Stewart, Patrick D. Shaw ;
Kolek, Stefan A. ;
Sim, Edith ;
Garman, Elspeth F. .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2013, 69 :1433-1446
[2]   Seeds to crystals [J].
Bergfors, T .
JOURNAL OF STRUCTURAL BIOLOGY, 2003, 142 (01) :66-76
[3]   Structural and functional studies of mycobacterial IspD enzymes [J].
Bjorkelid, Christofer ;
Bergfors, Terese ;
Henriksson, Lena M. ;
Stern, Ana Laura ;
Unge, Torsten ;
Mowbray, Sherry L. ;
Jones, T. Alwyn .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2011, 67 :403-414
[4]   Porous silicon: an effective nucleation-inducing material for protein crystallization [J].
Chayen, NE ;
Saridakis, E ;
El-Bahar, R ;
Nemirovsky, Y .
JOURNAL OF MOLECULAR BIOLOGY, 2001, 312 (04) :591-595
[5]  
Cowan-Jacob S., 2007, COMMUNICATION
[6]  
Cowan-Jacob S., 2014, COMMUNICATION
[7]   Using natural seeding material to generate nucleation in protein crystallization experiments [J].
D'Arcy, A ;
Mac Sweeney, A ;
Haber, A .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 2003, 59 :1343-1346
[8]   An automated microseed matrix-screening method for protein crystallization [J].
D'Arcy, Allan ;
Villard, Frederic ;
Marsh, May .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 2007, 63 :550-554
[9]   Protein crystallization on polymeric film surfaces [J].
Fermani, S ;
Falini, G ;
Minnucci, M ;
Ripamonti, A .
JOURNAL OF CRYSTAL GROWTH, 2001, 224 (3-4) :327-334
[10]  
Gerhardt S., 2014, COMMUNICATION