Draft genome sequence of Cercospora canescens: a leaf spot causing pathogen

被引:0
作者
Chand, Ramesh [1 ]
Pal, Chhattar [1 ]
Singh, Vineeta [1 ]
Kumar, Manoj [1 ,2 ]
Singh, Vinay Kumar [3 ]
Chowdappa, Pallem [4 ]
机构
[1] Banaras Hindu Univ, Inst Agr Sci, Dept Mycol & Plant Pathol, Varanasi 221005, Uttar Pradesh, India
[2] Banaras Hindu Univ, Fac Sci, Dept Biochem, Varanasi 221005, Uttar Pradesh, India
[3] Banaras Hindu Univ, Sch Biotechnol, Ctr Bioinformat, Varanasi 221005, Uttar Pradesh, India
[4] ICAR Cent Plantat Crops Res Inst, Kudlu 671124, India
来源
CURRENT SCIENCE | 2015年 / 109卷 / 11期
关键词
Cercospora canescens; functional annotation; gene prediction; sequencing and assembly; Vigna radiata; MAGNAPORTHE-GRISEA; ZEAE-MAYDIS; SSR-MARKERS; MAP KINASE; GENE; PLANT; GROWTH; BLAST; GENERATION; RESISTANT;
D O I
暂无
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Cercospora canescens (Ellis and Martin) is a hemibiotrophic pathogen causing leaf spot disease on mungbean (Vigna radiata L). Genome sequence (similar to 33.97 Mb) assembled in 8239 contigs with 10627 protein coding genes. A total of 2842 proteins were identified as homologous of 223 predicted and 7562 putative un-characterized involved in biological processes, molecular functions. The identified proteins are mainly involved in infection process used to compromise nutrients or destroy host tissues, the gycosidases, transposases and cytochrome P450s genes codes to signal transduction, cell wall breakdown, transporters, host stomata perception, adhesion, polyketide synthase and cercosporin. A total of 528 simple sequence repeats were also identified from the genome sequence assembly of C. canescens. This study provides insights into pathogenic mechanism and a better understanding of virulence differentiation of C. canescens. It will also help in identification of similarity and differences in regions among the genomes of different species of Cercospora.
引用
收藏
页码:2103 / 2110
页数:8
相关论文
共 50 条
  • [1] Genome sequencing and annotation of Cercospora sesami, a fungal pathogen causing leaf spot to Sesamum indicum
    Sinha, Shagun
    Navathe, Sudhir
    Singh, Sakshi
    Gupta, Deepak K.
    Kharwar, Ravindra Nath
    Chand, Ramesh
    3 BIOTECH, 2023, 13 (02)
  • [2] Draft Genome Sequence of Alternaria longipes Causing Tobacco Brown Spot
    Feng, Zhonghong
    Li, Yaxin
    Ma, Xueyan
    Duan, Yangbo
    Zhang, Rong
    Hsiang, Tom
    Niu, Yongchun
    Sun, Guangyu
    PLANT DISEASE, 2022, 106 (02) : 734 - 736
  • [3] Draft Genome Sequence of Carrot Alternaria Leaf Blight Pathogen Alternaria dauci
    Liu, Xing
    Zhao, Donghang
    Ou, Chenggang
    Hao, Weidong
    Zhang, Yifan
    He, Yongheng
    Zhao, Zhiwei
    Zhuang, Feiyun
    PLANT DISEASE, 2023, 107 (07) : 2197 - 2200
  • [4] CERCOSPORA CANESCENS: CAUSE OF LEAF SPOT DISEASE ON LETTUCE CROP IN BALI PROVINCE, INDONESIA
    Mirah, A. A. I.
    Darmadi, A. A. K.
    Suriani, N. L.
    Swantara, M. D.
    SABRAO JOURNAL OF BREEDING AND GENETICS, 2023, 55 (06): : 2006 - 2016
  • [5] New Report of Cercospora canescens Isolates from Coastal Regions of Odisha, India causing Cercospora Leaf Spot (CLS) Disease in Mung Bean (Vigna radiata L.)
    Mahapatra, Sushree Suparna
    Beura, Surjya Kanta
    Swain, Dhaneswar
    Jadhao, Kundan R.
    Rout, Gyana Ranjan
    LEGUME RESEARCH, 2023, 46 (09) : 1247 - 1252
  • [6] Draft Genome Sequence for the Tree Pathogen Phytophthora plurivora
    Vetukuri, Ramesh R.
    Tripathy, Sucheta
    Malar, Mathu C.
    Panda, Arijit
    Kushwaha, Sandeep K.
    Chawade, Aakash
    Andreasson, Erik
    Grenville-Briggs, Laura J.
    Whisson, Stephen C.
    GENOME BIOLOGY AND EVOLUTION, 2018, 10 (09): : 2432 - 2442
  • [7] Management Strategies using Phytoextracts and Fungicides Against Cercospora Leaf Spot of Mungbean Incited by Cercospora canescens under in vitro and in vivo Conditions
    Kumar, Naresh
    Singh, Mahabeer
    Lakhran, Lalita
    Prajapati, Satyadev
    Maurya, Shivam
    LEGUME RESEARCH, 2023, 46 (09) : 1240 - 1246
  • [8] GWAS reveals a rapidly evolving candidate avirulence effector in the Cercospora leaf spot pathogen
    Chen, Chen
    Keunecke, Harald
    Bemm, Felix
    Gyetvai, Gabor
    Neu, Enzo
    Kopisch-Obuch, Friedrich J.
    Mcdonald, Bruce A.
    Stapley, Jessica
    MOLECULAR PLANT PATHOLOGY, 2024, 25 (01)
  • [9] Pathogenicity Variation in Two Genomes of Cercospora Species Causing Gray Leaf Spot in Maize
    Cheng, Zixiang
    Lv, Xiangling
    Duan, Canxing
    Zhu, Hanyong
    Wang, Jianjun
    Xu, Zhennan
    Yin, Huifei
    Zhou, Xiaohang
    Li, Mingshun
    Hao, Zhuafang
    Li, Fenghai
    Li, Xinhai
    Weng, Jianfeng
    MOLECULAR PLANT-MICROBE INTERACTIONS, 2023, 36 (01) : 14 - 25
  • [10] Draft Genome Sequence of Cumin Blight Pathogen Alternaria burnsii
    Feng, Zhonghong
    Hsiang, Tom
    Liang, Xiaofei
    Zhang, Rong
    Sun, Guangyu
    PLANT DISEASE, 2021, 105 (04) : 1165 - 1167