Algoriphagus aestuariicola sp nov., isolated from estuary sediment

被引:12
作者
Jia, Xiaomeng [1 ]
Jia, Baolei [1 ]
Kim, Kyung Hyun [1 ]
Jeon, Che Ok [1 ]
机构
[1] Chung Ang Univ, Dept Life Sci, Seoul 06974, South Korea
关键词
Algoriphagus aestuarii; Bacteroidetes; new taxa; taxonomy; estuary sediment; FRESH-WATER LAKE; EMENDED DESCRIPTION; TIDAL-FLAT; BACTERIUM; FLAVOBACTERIACEAE; RATKOWSKYI; HITONICOLA; AQUATILIS; SEAWATER; FAMILY;
D O I
10.1099/ijsem.0.001711
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-staining-negative and strictly aerobic bacterium, designated strain S2-A1(T), was isolated from estuary sediment in South Korea. Cells of strain S2-A1(T) were oxidase-and catalase-positive rods without a gliding motility. Growth was observed at 15-40 degrees C (optimum, 37 degrees C), at pH 6.0-10.0 (optimum, pH 7.0-7.5) and in the presence of 0-4.0% (w/v) NaCl (optimum, 0.5-1.0 %). The sole respiratory quinone was MK-7. iso-C-15:(0), summed feature 3 (comprising C-16:1 omega 7c/C-16:1 omega 6c)and summedfeature 9 (comprising iso-C-17:(1 omega)9c/C-16:(0) 10-methyl) were found as the major fatty acids (>5% of the total fatty acids). The polar lipids of strain S2-A1(T) consisted of phosphatidylethanolamine, an unidentified aminophospholipid, three unidentified aminolipids and five unidentified lipids. The G+C content of the genomic DNA was 45.6 mol%. Strain S2-A1(T) was most closely related to Algoriphagus taeanensis HMC4223(T) with a 97.7% 16S rRNA gene sequence similarity. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain S2-A1(T) formed a tight phyletic lineage with members of the genus Algoriphagus. On the basis of phenotypic, chemotaxonomic and molecular features, strain S2-A1(T) clearly represents a novel species of the genus Algoriphagus, for which the name Algoriphagus aestuariicola sp. nov. is proposed. The type strain is S2A1(T) (= KACC 18987(T) = JCM 31546(T)).
引用
收藏
页码:914 / 919
页数:6
相关论文
共 30 条
[1]   Chimaereicella boritolerans sp nov., a boron-tolerant and alkaliphilic bacterium of the family Flavobacteriaceae isolated from soil [J].
Ahmed, Iftikhar ;
Yokota, Akira ;
Fujiwara, Toru .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2007, 57 :986-992
[2]  
Bernardet JF, 2002, INT J SYST EVOL MICR, V52, P1049, DOI [10.1099/ijs.0.02136-0, 10.1099/00207713-52-3-1049]
[3]   Algoriphagus ratkowskyi gen. nov., sp nov., Brumimicrobium glaciale gen. nov., sp nov., Cryomorpha ignava gen. nov., sp nov and Crocinitomix catalasitica gen. nov., sp nov., novel flavobacteria isolated from various polar habitats [J].
Bowman, JP ;
Mancuso, C ;
Nichols, CM ;
Gibson, JAE .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2003, 53 :1343-1355
[4]   Algoriphagus hitonicola sp nov., isolated from an athalassohaline lagoon [J].
Copa-Patino, Jose L. ;
Arenas, Maria ;
Soliveri, Juan ;
Sanchez-Porro, Cristina ;
Ventosa, Antonio .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2008, 58 :424-428
[5]  
Cowan ST., 1993, MANUAL IDENTIFICATIO, V3rd
[6]  
Felsenstein J., 2002, PHYLIP PHYLOGENY INF
[7]   PREPARATION OF BUFFERS FOR USE IN ENZYME STUDIES [J].
GOMORI, G .
METHODS IN ENZYMOLOGY, 1955, 1 :138-146
[8]   A fluorimetric method for the estimation of G+C mol% content in microorganisms by thermal denaturation temperature [J].
Gonzalez, JM ;
Saiz-Jimenez, C .
ENVIRONMENTAL MICROBIOLOGY, 2002, 4 (11) :770-773
[9]   Algoriphagus trabzonensis sp nov., isolated from freshwater, and emended description of Algoriphagus alkaliphilus [J].
Inan, Kadriye ;
Kacagan, Murat ;
Ozer, Aysegul ;
Belduz, Ali Osman ;
Canakci, Sabriye .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2015, 65 :2234-2240
[10]   Altererythrobacter gangjinensis sp nov., a marine bacterium isolated from a tidal flat [J].
Jeong, Sang Hyeon ;
Jin, Hyun Mi ;
Lee, Hyo Jung ;
Jeon, Che Ok .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2013, 63 :971-976